Hydrogenimonas thermophila: RZR91_09385
Help
Entry
RZR91_09385 CDS
T09456
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
htm
Hydrogenimonas thermophila
Pathway
htm03030
DNA replication
htm03430
Mismatch repair
htm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RZR91_09385 (dnaE)
03430 Mismatch repair
RZR91_09385 (dnaE)
03440 Homologous recombination
RZR91_09385 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
htm03032
]
RZR91_09385 (dnaE)
03400 DNA repair and recombination proteins [BR:
htm03400
]
RZR91_09385 (dnaE)
Enzymes [BR:
htm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RZR91_09385 (dnaE)
DNA replication proteins [BR:
htm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RZR91_09385 (dnaE)
DNA repair and recombination proteins [BR:
htm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RZR91_09385 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
T2SSK
HHH_3
PPR_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WOE69317
LinkDB
All DBs
Position
complement(1829782..1833351)
Genome browser
AA seq
1189 aa
AA seq
DB search
MKPRFTHLHLHTEYSLLDGANKISKLAGRLKELGMDSVAITDHGNMFGAIDFYQQMKKEG
IKPIIGMEAYLHNQDDIGDKSTRQRFHLCLYAKNEIGYKNLMYLSSQAYINGFYYYPRIN
KKLLREHSEGLICSSACLQGEVNWHMNLSERNVKFGAKGYEKAKEIALEYKEIFGDDFYL
ELMRHGIGDQHAIDELVLKLSLETGIKIVATNDTHYLYPDDAEPHEAFMCIAMNKLYDDP
DRLRHSVHEFYLKSPEEMAELYADIPEALDNTQEIADKCNLELNLGNPTPPNFKFAREYA
AKVGLEVPEPEEQNSFANDEVLFIHECRKGLEERLKYVDPSRHEEYRERLETEMKIINQM
KFPGYMLIVWDFVREAKERGIPVGPGRGSAAGSLVAYALKITNIDPMKYDLLFERFLNPE
RVSMPDIDMDFCQARRGEIIDYVVEKYGRFNVAQVITFGSLLAKGVIRDVARVLGVSYAE
ADKMAKLIPDELGITLNGKGKEGTDGFKPGAYQKEPKLRELIETNPTAARVWKFALALEG
LKRNAGMHAAGVVISNEELWHKTPLYKPSGEDTLVTQYSLNFLEDVDLIKFDFLGLKTLT
VIDNAVKLVKKRHNIDIDLDNLPMDDKKVYETIQSGETIGMFQIESGGMQQLNSKLKPSN
FEDIVAVLALYRPGPMESGMLDDFIERKHGRQEITYMFPQLEEILKPTYGVIVYQEQVMQ
IVQTIGGFSLGKADIVRRAMGKKKFDLMQKYKEEFAQGAKAQGLDYDKAAELFDLIEKFA
GYGFNKSHSAAYAMVTYQTAWLKTHYPAEFMAALLTSEKDNTDKVVKYIDEVKRLGIKML
APDINRSALEFTPDSNDDEENEVILFGLGAIKGVGEAAVKSILEAREKGPFESLNDFVSR
IDTQKVNKKVIESMIKAGALDSFGYSRRALLESIDAIIEAMHESARAQQMAIGSLFGDDE
EMVNIKVDIMPMDEYDQKSILELEKESLGFYVSGHPLDPFRDELSKIDYTLSSDMDQIAD
GSDALLIGKVEEITTKISKKGNKFGIANVMDLHGNIEITLFERQLEQLEGMNLDEPIGFK
VSITRDGDFTRMRVHKIMELKACKKEKVETRMVEKPEEPMIIRLNLDHEKMRILEEIYRL
AQSHPGRKPLKLLLCSKLQDVEIESSIYVNEQMEERLKEMEEVEILASA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaagatttacacatttacatttacatacagagtattcactgcttgatggtgcc
aataaaatttctaaacttgccggacggcttaaagagcttggtatggattcggttgctata
accgatcacggcaatatgtttggagcgatagatttttaccagcagatgaaaaaagagggg
attaagccaattattggaatggaggcttaccttcataatcaagatgatataggtgataaa
agtacacgtcagcgttttcacctctgtctttatgcaaaaaatgagattggttataaaaac
ctgatgtatctaagctctcaagcatacattaacggcttttactactatcctcgcattaac
aaaaagttgcttcgcgagcatagtgaagggttgatatgctcatcagcctgtctgcaaggt
gaagttaactggcatatgaatctgagtgaaagaaatgtcaagtttggtgcaaaagggtat
gaaaaagcaaaagagatagcactggaatataaagagatctttggagatgacttttatctt
gagttgatgcgtcacggtattggcgatcagcatgctattgatgagttggttttgaagttg
agtcttgaaacagggatcaaaatagtagctacaaacgatacacactatctatatccggat
gatgcagagcctcatgaagcgtttatgtgtattgctatgaacaaactctatgatgatcct
gatcgtttacgccactctgttcatgagttttatctcaaatcgccagaagagatggctgag
ctttatgccgatattcctgaagctttggataatacacaagagattgctgataagtgtaat
cttgaattaaatcttggtaatccaactccacctaactttaagtttgcaagagagtatgca
gcaaaagttggtttggaagtgcctgaaccagaagagcagaacagttttgcaaatgatgaa
gttctctttattcacgaatgccgtaaagggcttgaagagcgtttgaagtatgttgatcct
tcacgccacgaagagtatagagagcgtcttgaaactgagatgaagatcattaaccagatg
aaattcccagggtatatgttgatcgtttgggatttcgtgcgtgaagcaaaagagagagga
attccagttggacctggtcgtggttctgctgcgggaagccttgttgcatatgctctgaag
attaccaatattgatccgatgaagtatgatcttctatttgagcgatttttgaaccctgag
cgtgtaagtatgcccgatatcgatatggacttttgtcaggcaagacggggtgagattatt
gattatgttgtagagaagtatggtcgatttaatgttgcacaggttattacttttggttct
cttcttgccaagggagttatacgagatgttgcacgtgttcttggagttagttacgctgaa
gcagataagatggcaaagcttattcctgatgaactgggaattactcttaatggaaaaggc
aaggaaggaactgacgggtttaaacctggagcttaccagaaagagccaaaacttagagaa
ctcattgaaacaaatcctacagctgctagggtatggaagtttgcactggctcttgaaggt
ctaaaacgaaatgccggtatgcacgcagctggtgttgttatctccaatgaagagttatgg
cacaaaacaccactttacaaaccttcaggcgaagatactcttgtaacgcagtattcactg
aactttcttgaagatgtcgatttgatcaagtttgactttcttggtcttaaaacacttaca
gtaattgacaatgctgttaagcttgttaaaaaacgtcataacattgatatagatcttgat
aatttaccgatggatgacaagaaagtttacgagacgattcaaagcggagagactattgga
atgttccagattgaatctggcggaatgcagcagttaaactccaaattgaagcctagtaac
tttgaagatattgtagcggtacttgctctttatcgtcctggtccaatggaatcggggatg
cttgatgattttattgagcgtaagcatggacggcaagagattacctatatgttccctcag
cttgaagagattctcaagccaacttacggtgtcattgtttaccaagagcaggttatgcag
attgttcagacaatcggtggttttagtcttggtaaagcagatattgtccgtcgtgcgatg
ggtaagaaaaaatttgacttgatgcaaaaatataaagaggagtttgcacagggagcaaaa
gctcaagggcttgactatgataaagcggcagaactttttgacttgatcgaaaaatttgct
ggttacggttttaacaagtctcactcagcagcttatgcaatggttacttatcagacagct
tggttaaaaacccactatccagctgaatttatggcagcgcttttaacaagcgaaaaagat
aataccgacaaagttgtcaagtatattgatgaggttaagcgtcttggtattaagatgctg
gctccagatattaacagatcagcactagagtttacaccagatagtaatgacgatgaagag
aatgaagttattctatttggactaggagcaattaaaggtgttggagaagctgctgtaaag
agtattttagaggcaagagagaagggaccatttgaatcattaaatgattttgtatctcgt
atcgatactcagaaggtaaacaaaaaagtcattgaatctatgatcaaagctggtgcgcta
gatagctttggttatagccgccgtgcactgctagagtcgatagatgcaatcatagaagct
atgcatgaatcagcaagagcgcagcagatggctattggttcactttttggcgacgatgaa
gagatggtgaatatcaaagtagatattatgcctatggatgagtatgatcaaaagtctata
cttgagcttgaaaaggagtctttaggtttttatgtttccggtcaccctttagatccattc
cgtgatgaactttctaaaatagactatactttatccagtgatatggatcagattgccgat
ggctcagatgctcttttaataggcaaagtagaagagataactacaaagataagtaaaaaa
ggcaataagtttggtattgctaacgtaatggaccttcatggcaacattgagattacactt
tttgagagacagcttgaacagcttgagggtatgaatcttgatgaaccgataggatttaaa
gtctccattacaagagatggagattttacacgaatgcgtgtccataaaattatggaactt
aaagcatgtaaaaaagagaaagtagagacacgcatggttgaaaaaccagaagagcctatg
ataattcgccttaacctagatcacgaaaagatgagaattttagaagagatttacagactt
gcacagagtcatccaggcagaaaacctcttaagctattactatgctcaaagctgcaagat
gtagagattgaatcatcaatttacgttaatgaacagatggaagagcggcttaaagagatg
gaagaagtagagattttagcatcagcttag
DBGET
integrated database retrieval system
