Hydrogenophaga taeniospiralis: KI616_00920
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Entry
KI616_00920 CDS
T08018
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KI616_00920 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htn03019
]
KI616_00920 (recQ)
03400 DNA repair and recombination proteins [BR:
htn03400
]
KI616_00920 (recQ)
Enzymes [BR:
htn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI616_00920 (recQ)
Messenger RNA biogenesis [BR:
htn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KI616_00920 (recQ)
DNA repair and recombination proteins [BR:
htn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KI616_00920 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
UCU94478
LinkDB
All DBs
Position
complement(196546..198447)
Genome browser
AA seq
633 aa
AA seq
DB search
MIDISENGETLEACAGVLQEVFGYDAFRGPQADIVRHVSEGGDALVLMPTGGGKSLCFQI
PAIVRARGGLGLTVVVSPLIALMHDQVGALLEAGVAAAFLNSSLSSEEAQAIEKQMLRGE
ITLLYAAPERLTTPRFLALLDALHERGKLSMFAIDEAHCVSQWGHDFRPEYRALVVLHER
FAGVPRVALTATADDLTREDIVNHLQLQDARRFISSFDRPNIRYTIVEKKDGSTQLLRFI
RDEHMGASGHDAGIVYCQSRKRVEEVASMLCDAGLNALPYHAGLDAAVRQRHQDRFLREE
GVIMVATIAFGMGIDKPDVRFVAHLDMPKNIEGYYQETGRAGRDGEPATAWMVYGLQDVV
NQRRMIDESPAADEFKQVLRGKLDALLTLAEASDCRRVRLLAYFGEASQPCGNCDNCISP
PALDDGTESARKLLSCIYRVQQSSGMAFGAGHIMDILRGKITEKVTQYGHDKLSTFGIGA
DLGETQWRALMRQLVAREAIHVDSAHFNTLHLADAARAILKGETQVWLRPLSEKKKAASR
SKSGRSSQAALAPDGQPLSLAERECLDALKAWRAEVAREHNLPAFVIFHDATLRAIAAQK
PRSMADLDGVAGIGQKKREAYGAEVLRVVSAFE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgattgatatttcagaaaacggtgaaaccctggaagcctgcgccggtgtgctgcaggag
gtgtttggctacgacgccttccgaggtccgcaggccgacatcgtgcggcatgtgagcgag
ggtggcgacgcgctggtgctgatgcccacgggcggcggcaagtcgctgtgtttccagatc
ccggccatcgtgcgcgcgcgcggcggcctgggcctgacggtggtggtctcgccgctgatc
gcgctgatgcacgaccaggtgggcgcgttgctggaagcgggcgtggccgcggccttcctg
aattccagcctcagcagcgaagaggcgcaggcgatcgagaagcagatgctgcgtggcgag
atcaccctgctctacgccgcgcccgagcgcctgaccacgccgcgcttcctggcgctgctg
gacgcgctgcacgaacgcggcaagctctcgatgtttgccatcgacgaagcgcactgcgtg
agccagtggggccacgacttccggcccgagtaccgcgcgctggtggtgctgcacgagcgc
tttgccggcgtgccgcgcgtggcgctcaccgccaccgccgatgacctgacgcgcgaagac
atcgtgaaccacctgcagctgcaggacgcgcggcgcttcatcagcagtttcgaccggccg
aacatccgctacaccatcgtcgagaagaaggacggatcgacccagttgctgcgcttcatc
cgcgacgaacacatgggcgcgagcggccatgacgccggcatcgtctactgccagtcgcgc
aagcgggtggaagaagtggccagcatgttgtgcgacgcgggcctcaacgccctgccctac
cacgccggcctggacgcggccgtgcggcagcggcaccaggaccgcttcctgcgcgaagag
ggcgtgatcatggtcgcgaccatcgcgtttggcatgggcatcgacaagcccgacgtgcgc
ttcgtggcccacctggacatgcccaagaacatcgagggctactaccaggagaccggccgc
gccgggcgcgacggcgagcccgccaccgcgtggatggtctacggcctgcaggacgtggtg
aaccagcgccgcatgatcgacgaaagcccggcggccgacgagttcaagcaggtgctgcgc
ggcaagctcgacgccctgctcacgctggccgaagcgagcgactgccggcgtgtgcggctg
ctggcctactttggtgaggccagccagccttgcgggaactgcgacaactgcatcagcccg
cccgcgctggacgatggcaccgagtccgcgcgcaagctgctctcgtgcatctaccgcgtg
cagcagtccagcggcatggccttcggcgccggccacatcatggacatcctgcgcggcaag
atcaccgagaaggtgacgcagtacggccacgacaagctcagcaccttcggcatcggcgcc
gacctaggcgaaacgcagtggcgcgcgctgatgcgccagttggtcgcgcgcgaagcgatt
cacgtggactcggcccacttcaacaccctgcacctggccgacgcggcgcgcgccatcctc
aagggtgaaacccaggtctggctgcggcccctgagcgagaagaagaaagccgcgtcgcgc
agcaagagcggccgcagcagccaggcggcgctggcgcccgacggccagccgctctcgctg
gccgaacgcgaatgcctggacgcgctcaaggcctggcgtgccgaagtggcgcgcgaacac
aacctgccggcgttcgtgatctttcacgacgccaccctgcgcgcgatcgccgctcagaaa
ccacgctcgatggccgatctggatggtgtggccggcatcggccagaaaaaacgcgaggcc
tatggcgccgaggtgctgcgggtcgtgagtgcttttgaatga
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