Hydrogenophaga taeniospiralis: KI616_03305
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Entry
KI616_03305 CDS
T08018
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KI616_03305 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htn03021
]
KI616_03305 (rpoA)
03400 DNA repair and recombination proteins [BR:
htn03400
]
KI616_03305 (rpoA)
Enzymes [BR:
htn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KI616_03305 (rpoA)
Transcription machinery [BR:
htn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KI616_03305 (rpoA)
DNA repair and recombination proteins [BR:
htn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KI616_03305 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF211
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UCU94923
LinkDB
All DBs
Position
635207..636193
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AA seq
328 aa
AA seq
DB search
MLNNLLKPKTINVEQISTNRAKVTLEPFERGYGHTLGNALRRVLLSSMTGHAPTEVTIAG
VVHEYSSIDGVQEDVVNMLLNLKGVVFKLHNRDEVTLSLRKDGEGLVTAADIQTPHDVEI
VNPGHVIATLSAGAKLDMQIKVEKGRGYVPGSLRRNDDQSRSLGRIVLDASFSPVRRVSY
TVESARVEQRTDLDKLVLEIETNGSIGPEEAVRASAKILVEQLAVFAQLEGVELSAFDAP
AQRSSQQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLASRGLTLGMKLENWPPAGLDKH
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaatctgctcaagcccaaaaccatcaacgtcgagcaaatttcgaccaatcgc
gccaaagtgaccctggagccttttgagcgtggctacggtcacacgctgggcaacgcgctg
cgtcgcgtgctgctgtcttccatgacgggccacgcgcccaccgaagtcaccatcgcgggc
gtggtgcacgagtactcttccattgatggcgtgcaggaagacgtcgtcaacatgttgctg
aatctcaagggcgtggttttcaaactccacaaccgcgacgaagtgaccctgagcctgcgc
aaggatggcgaaggcctggtcaccgcggctgacatccagacaccgcacgacgtcgagatc
gtcaaccccggtcacgtcattgccaccctgtcggccggcgccaagctggacatgcagatc
aaggtcgaaaaaggccgcggttatgtgccgggcagcctgcgtcgcaacgacgaccagtcg
cgttcgctgggccgtattgtgctcgacgcttcgttctcgcccgtgaggcgcgtgagctac
accgtcgaaagcgcccgcgttgagcagcgtaccgatctcgacaagctggttctggaaatt
gaaaccaacggttccatcggtccggaagaagccgttcgtgcttcggccaagatcctggtg
gaacagctggcggtgttcgctcagctcgaaggcgtggaactgtcggcattcgacgcacct
gcccagcgcagctcgcagcagtttgatccgatcctgctgcgtccggtggacgagcttgaa
ctcaccgtgcgttcggccaactgcctcaaggcagagaacatctattacatcggtgacctg
atccagcgcaccgagaacgagctgctcaagacccccaacctgggtcgcaagtcgctcaac
gaaatcaaggaagtgctcgcttcgcgcggtctgaccttgggtatgaagcttgaaaactgg
ccgccggctggtctcgacaagcactga
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