Hydrogenophaga taeniospiralis: KI616_07825
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Entry
KI616_07825 CDS
T08018
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KI616_07825 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htn03000
]
KI616_07825 (nifA)
Transcription factors [BR:
htn03000
]
Prokaryotic type
Helix-turn-helix
Other families
KI616_07825 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
GAF_3
Mg_chelatase
AAA_2
AAA
AAA_16
bpMoxR
AAA_7
Parvo_NS1
SLATT_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UCU96968
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Position
1574619..1576295
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AA seq
558 aa
AA seq
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MMNTQMTAARRELNVIYEISKTLATSLDVHKTFREALNYLLQAMDWRRAFVVLSEPGSAE
LHGLCAVGLSHEESQRLKFLPGEGIVGRVYATGMPFSVPDLRAEPLFLNRTGGADQSPGA
CVAMLATPIRADRRTVGVLAVDYLNPQTRSNFGDDLQLLKMVSTLMGQALLLHRSVSAAH
DSMQDEVRRMSKALKSGNKIEHVVGTSAPMLEVFDQVHQVAPARTTVLLRGESGTGKEVI
ARAIHSLSPRKREAFVCVNCAALTESLLESELFGHEKGSFTGAQGQRKGRFEMAHGGTLF
LDEIGDISASFQAKLLRVLQEREFERVGGGTPVKVDVRLILATNRDLERMVKAGEFRADL
YYRINVVSIQLPPLRERREDIPAMAKHFLDRFNRDNARTTQFSPAAMRVLSSCYWPGNVR
ELENCVERTATMAHSDVITDLAFPCQGNRCLTQVLHHIDREDAVRPSRLTEIPIQERPMG
PAGADTALPTPPEVSPEPVAVAAPTAVADGKPEGESERLVWAMERSGWVQAKAARLLKIS
PRQMGYALQKHGIEVRKF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgatgaacacacaaatgaccgcagcgcggcgcgagctgaacgtgatctacgagatcagc
aagacgctcgcgacctcgctcgacgtccacaaaacgtttcgtgaagcccttaactatttg
ttgcaggcaatggactggcgccgtgcctttgtcgtgctgtccgaaccgggctcggccgag
ttgcacggcctgtgcgcggtcggtctgagccacgaagaaagccagcggctgaagttcctg
ccgggcgagggcatcgtcggtcgcgtctacgccacgggcatgcccttttcggtgcccgat
ctgcgcgccgaaccgctgttcctgaaccgcaccggtggcgccgaccagagcccgggtgcc
tgtgttgccatgctggccacgccgatccgggcggaccggcgcacggtgggtgtgctggcg
gtcgattacctgaatccgcagacccgcagcaacttcggtgacgacctgcagttgctcaag
atggtgtccacgctgatgggccaggcgctgctcttgcaccgcagtgtcagcgcggcccac
gacagcatgcaggacgaggtgcgccgcatgtccaaggcgctgaagagcggcaacaagatc
gaacacgtggtgggcacctcggcgcccatgctggaggtgtttgaccaggtgcaccaggtg
gccccggcgcgcacgacggtgctgttgcgcggcgagagcggcactggcaaggaagtgatc
gccagggccatccacagcctgtcgccgcgcaagcgcgaagcctttgtctgtgtcaactgc
gcggcgctgaccgagtcgctgctggagagcgaactcttcggccatgaaaagggctcgttc
accggcgcccagggtcagcgcaagggccgcttcgaaatggcgcacggcggcaccctgttc
ctcgacgagatcggtgacatctcggcctcgttccaggccaagctgctgcgcgtgttgcag
gagcgcgagttcgagcgggtggggggcggcacgccggtgaaggtggatgtgcgcctgatc
ctcgccaccaaccgggatctggagcgcatggtgaaggcgggcgagttccgcgccgacctg
tactaccgcatcaacgtggtcagcatccagctgccgccgctgcgcgagcgccgcgaagac
atcccggccatggccaaacattttctcgaccgcttcaaccgcgacaacgcgcgaaccacc
cagttcagcccggcggcgatgcgggtgctgagcagctgttactggccgggcaatgtgcgc
gagctggagaactgcgtggaacgcaccgccaccatggcgcacagcgacgtgatcaccgac
ctggcttttccctgccagggcaaccgctgcctgacgcaggtgctgcatcacatcgaccgc
gaagacgcggtgcggccgagtcgcctgacggagattccgatccaggagcgcccgatgggg
cccgccggggccgacaccgccttgcccacaccccccgaggtctctcccgagccggtcgcc
gtcgccgcgccgaccgccgtcgccgatggcaagcccgaaggtgaaagcgagcgcctggtc
tgggcgatggagcgcagtggctgggtgcaggccaaggcggcgcgcctgctgaagatttca
ccgcgccagatgggctatgccttgcagaagcatggcatcgaggttcggaagttttga
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