Hydrogenophaga taeniospiralis: KI616_08340
Help
Entry
KI616_08340 CDS
T08018
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KI616_08340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htn03000
]
KI616_08340
03400 DNA repair and recombination proteins [BR:
htn03400
]
KI616_08340
Enzymes [BR:
htn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KI616_08340
Transcription factors [BR:
htn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KI616_08340
DNA repair and recombination proteins [BR:
htn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KI616_08340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HHH_5
HTH_23
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
UCU95834
LinkDB
All DBs
Position
complement(1657465..1659000)
Genome browser
AA seq
511 aa
AA seq
DB search
MNTPDSIDDEARYRALCSHDARFDGRFFTAVTSTGIYCRPVCRVRTPRRENCRFFEHAAQ
AEQAGFRPCLRCRPELAPLQRHWSVEDARSILVQQATQWLDNPQNWPGASEGGATVARLA
LRLGVSDRHLRRIFEDRLGVSPLQYLLTRKLLAAKQMLADTALPITQIALASGFASLRRF
NAAFGDHYGLSPGQMRRQPLSADSQRDGTPVQLFWRPPFDVAALLRFLAERQLPGIEHVQ
PDAPLGLQRTARIESGGLMHTGWFSVRFDPDANRLGLQVSDSLLPVLPAVIWRVRALFDL
DANPLAINSALHADFPAGDGLRVPGCFDGFELAVRAILGQQITVAAARTLAIRLTERLGE
AITTPHPRLHRLFPTAQALASVSPDILGELGIVRQRQAALQSLARAVVEGGLVLNAFADA
HTTTQALQALPGIGPWTAQYIAMRALRWPDAWPVGDVALIKTLGIEGRGRAAALEADRQS
AAWRPWRSYAVIRAWAGTHANPILTSGVPSP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccccgactcgatcgacgacgaggcccgctatcgggcgctgtgttcgcacgac
gcccggttcgacggccggtttttcaccgctgtcacctccacagggatctactgccggccg
gtttgccgcgtgcgcacgccgcggcgcgagaactgccgcttcttcgagcacgcggcccag
gccgaacaggcgggcttccggccctgcctgcgctgccgcccggagcttgcaccactgcaa
cggcactggtctgtcgaggacgcgcgcagcatcctggtgcaacaggccacgcaatggctg
gacaacccgcaaaattggcccggggccagcgaaggcggcgccacggtggcgcggcttgcc
ttgcgcctgggtgtgagcgaccgccatttgcgccgcattttcgaagaccggctgggcgtc
tcacccctgcaatacctgctcacgcgcaagttgctggccgccaagcagatgctggctgac
acggcgttgcccatcacccagatcgccctggccagcggcttcgccagcctgcgccggttc
aacgccgccttcggggatcactacggcttgagccccggccagatgcgccgccagccactc
agcgccgacagccaacgcgacggcaccccggtgcagctgttctggcgcccaccgtttgat
gtcgctgcgctcctgcgctttctcgccgaacgacaactgcccggcatcgagcacgtccag
ccagacgctccccttggcctgcagcgaaccgcacggatcgaatccggcgggttgatgcac
accggctggttttccgtgcgattcgatcccgacgccaaccggctggggttgcaggtgagc
gacagccttctccccgtcctgccggccgtgatctggcgggtgcgcgccctgttcgacctc
gatgccaacccactggccatcaactctgccttgcacgccgactttcctgcgggtgatggc
cttcgcgtaccgggctgtttcgatggcttcgaactggccgtgcgtgccatcctggggcag
cagatcacagtggccgcggcgcgcaccctggccatccggctgaccgagcgactgggcgaa
gccatcaccacaccacatccccggttgcaccgcctgttcccgacggcccaggcactggcc
agcgtcagtcccgacatcctgggcgaactgggcatcgtgcgccagcgccaggcagccttg
cagtccctggcccgcgcggttgtcgaaggtggcctggtgctgaacgcctttgccgatgcg
cacaccaccacacaagccctccaggcgctgccgggcatcggcccctggaccgcacagtac
atcgcgatgcgggccctgcgctggcccgatgcctggccggtgggcgacgtggccctgatc
aaaaccctcggcatcgaagggcggggacgcgccgccgctctcgaagccgaccggcaatcg
gccgcctggcgaccttggcgcagctacgccgtgatccgcgcctgggccggcacccatgca
aaccccatccttacttctggagtgccatcaccatga
DBGET
integrated database retrieval system
