Hydrogenophaga taeniospiralis: KI616_15820
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Entry
KI616_15820 CDS
T08018
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KI616_15820 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htn03400
]
KI616_15820 (recB)
Enzymes [BR:
htn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KI616_15820 (recB)
DNA repair and recombination proteins [BR:
htn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KI616_15820 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Augurin
Baculo_19
Motif
Other DBs
NCBI-ProteinID:
UCU92313
LinkDB
All DBs
Position
complement(3287639..3291400)
Genome browser
AA seq
1253 aa
AA seq
DB search
MSEPLDASSFPLWGSRLIEASAGTGKTWTIAALYVRLVLGHGREYTGFSRPLMPSDILVM
TFTRAATRELSDRIRARLLEAARCFRNEAVPKKEDTFLHALLADYPDSSERQMAAWRLAM
AAECMDEASVFTIDAWAQRALREHAFDSGSLFEEELVADEQALQVQAAQDYWRRQCYGLN
ADELAEVLKIWPSLERLLSDVRDLLGKEPKLLSAAQTLTDVIAQSSQEHRVLLESLRAQW
RPRVLLMRGFVESQNPPKEHGWDGRKFSIRNITGWLDKLQAWAEGKDATESPDLATGWKR
LAPDGLREARSTGAGEAQMTSQEAEAFEAFATLELELQHLPKPETAARLHAAASVADRMR
QLKRQNNKFGFSDMLDRLDAALKGASGERLRERILAQYPVALIDEFQDTSPVQYGIFNQI
YRTQDNAREHALFLIGDPKQSIYGFRGADIYSYLQARDATQGRHYALSVNYRSTATLVQA
VNHGFIRAEQQLSGGAFDFRTADNNPLPFAAVEAKGRPDRWVCGGGEMPAITVVQDLQLR
SMGQARKAFAERCAQQVVEWLNDPANGFEREGQPFQRLRSKDIAILVRTGKEAAAVRRAL
QKRNVASVYLSDKDSVFQSDEARDLVHWLRAVATPQDAGLVRAALALASVGLSLSMLSRL
ANEDSVFDDYAQILRELRQVWLSQGVLAMLRQSLHRFGLAASWLALTSGERSLTNYLHLA
ELLQNASSELEGEQALIRWLMRQISEAVDQGEEQVVRLESDADLVKIVTVHKSKGLEYPV
VCLPFATSFRGFDARLVKTAMLPTPGGGRELVLDMDGHARDRYEQERMREDLRLLYVAMT
RPRHGLWLGFSAVKVGNSKSCVTHQSAMGRILGGLDEREAEGWLDPLQDLARECPGIAVQ
SAPGQTPLTGLLQREAMPVLQDAPEYLADFDRTWSIASYSRLTRDLKRGMSSNSESTAMP
MLGWISPLQVMRPADDEALDLAPGKLDVGSVSTLSGSAVSIGTDSAQVPSKPIWHSFKRG
PITGNFLHELLERLCAESFAIKDDPGLSSRLRARCEREGYEVEATALVDWMTELVNMRLP
GLDVSLVDLKSPRAELEFWLPSRQLDTARIDLLCREHLMPTVERPGLQSSSLHGMLMGFM
DLVFEHDGRYWVLDYKSNALGTEDSDYDSPALMQTMAEHRYDVQAAIYALALHRLLKARM
GSRYVPSRHLGGAAYLFLRGIHGPAGGVCTLEFPEALLKELDSMLEPARLLAA
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgcttgacgccagcagtttcccactctggggctcacgcctgatcgaagcc
agtgcggggactggcaagacctggaccatcgccgcgctgtacgtgcgtctggtgttgggc
catggtcgtgaatacacaggattttctcgccccttgatgccgtctgacatcctggtcatg
accttcacccgtgcagcaacacgtgaactctccgaccggattcgggcgcgcctgctggag
gccgccaggtgttttaggaacgaggcggttccgaaaaaggaggacaccttcctgcatgcg
ttgctggctgactatcctgacagcagcgaacggcagatggcggcctggcgactggccatg
gcagccgagtgcatggacgaggccagtgtgttcaccatcgacgcctgggcccagcgtgcg
ttgagggaacacgcctttgacagcggcagcttgtttgaggaggagttggtcgccgacgag
caggcccttcaggtgcaggcagcgcaggactactggcgccggcaatgctacgggctgaac
gccgatgagctggccgaggtcctgaaaatctggcccagtttggagcgcctgctctcggac
gtcagggacctgctgggcaaagagccgaagctgctgagtgcggctcagacgctgacggac
gtgattgctcagtccagccaggaacatcgggtgttgctcgaaagcttgcgcgcccagtgg
cgaccccgggttttgctgatgcgcggcttcgtcgagtcccagaacccacccaaagagcac
ggttgggatgggcgaaagttctcgatcaggaacatcacgggttggctggacaaactgcag
gcctgggctgagggcaaggacgccacggagagtcccgacctggccaccggctggaagcga
ctggcacccgacggcctgcgcgaggcccgatcaacgggggccggtgaggctcagatgacg
tcccaggaagccgaggcgttcgaggcgtttgcgaccctggagcttgaactgcagcacctg
ccaaaacccgagacggcagcccgcctgcacgcagcagccagtgtggcggatcggatgcgc
cagctcaagcggcagaacaacaagttcgggttctccgacatgctggatcggctggatgcc
gccctcaaaggtgccagcggtgagcgcttgcgcgagcgcatcctggcccagtaccctgtg
gcactgatcgacgagtttcaggacacgtcaccggttcagtacggcatcttcaaccagatc
taccgcacgcaagacaacgcccgagagcacgcgctgtttctgatcggcgatccaaagcag
tccatctacgggttccgcggggccgacatctacagctatcttcaagctcgcgacgccacc
caggggcggcactacgcgctgtccgtcaactaccgatcaaccgcaacacttgttcaggcc
gtcaaccacggcttcattcgcgccgagcagcaactcagcggtggtgcctttgatttcagg
acggcagacaacaaccccttgccattcgccgccgtcgaagccaaaggccgtccagatcgg
tgggtctgtggtggaggcgagatgcccgccatcacggtggtccaagacctgcaactccga
agcatgggccaggcccgcaaggcgtttgcagagcgctgcgcccaacaggtggtcgagtgg
ctcaatgatccagccaacggatttgaaagagaagggcagccctttcagcgtttgagatcc
aaagacatcgccattctggtgcgcaccggcaaagaggctgcggcggtacgcagggccctg
caaaagcgcaatgtggcttctgtgtatctgtccgacaaggactctgtttttcagagcgac
gaggcccgtgatctggtgcactggttgcgcgcggtggccacgcctcaggacgcgggattg
gtgcgagcagcgctggcattggccagcgtgggtctgtcgctgtcaatgctgtcacgtctg
gccaatgaagactcggtcttcgacgactacgcacagatcctgcgcgaactgcgccaggtg
tggctgagtcagggcgttctggccatgctgcggcagtccctgcaccgattcgggctggcg
gcaagctggctggcgctgaccagtggtgagcgcagtctgaccaattacctgcacctggcc
gaattgctgcaaaacgccagcagcgaactggagggcgagcaagccctcatccgctggttg
atgcgtcagatttcggaggctgttgatcagggcgaagaacaggtcgtgcgcttggagagc
gatgccgatctcgtgaaaatcgtgacggttcacaaaagcaaagggctggaatacccggtg
gtgtgcctgccatttgccacctcctttcgtggcttcgatgcccgtctggtgaagacggcc
atgttgcccacgccaggcggtggtcgtgagctggtactggacatggatggccatgccagg
gaccgctacgagcaagagcggatgcgcgaggatctgcggctgctgtacgttgcgatgacc
aggccgcgccacggtttgtggctggggttctctgcggtgaaggtgggcaacagcaagagc
tgtgtgacccatcaaagtgcgatgggtcggattttgggcgggctcgacgagcgcgaagcc
gagggctggctggatccgctgcaggacctggcgcgggagtgtcctggcatcgcggtgcaa
agcgcgcctggccagaccccactgaccggtttgttgcaacgcgaggccatgcctgtgctt
caggacgcgccagagtatctggccgacttcgacaggacctggagcattgccagttactcg
cggttgacccgagacctcaagcggggcatgagtagcaacagcgaaagcacagcgatgccc
atgctcggatggatctcgccattgcaggtgatgagacccgctgacgatgaggccttggac
ttggcgccaggcaaactggatgtgggatctgtgtccaccctgtcgggcagtgcagtttcg
atcggcacagacagcgcacaagtcccatccaaacccatttggcacagcttcaagcgggga
ccgatcacgggcaactttctgcacgagctgctggaacgactgtgtgccgaatctttcgca
atcaaagacgaccccggtttgtcctcacggcttcgggctcggtgtgagcgcgaaggatat
gaggttgaagcgacagccctggtggactggatgacggagctcgtcaacatgcgtctcccc
gggttggacgtgtcgctggtggacctgaaatccccacgcgcagagttggagttctggctt
ccgtcacgtcaactggacaccgcgcgcatcgatctgctgtgtcgagaacacctgatgccc
acggtggagcggcctggactgcagtcgagttccttgcacggcatgttgatgggtttcatg
gacctggtttttgaacacgatggtcgctactgggttttggactacaagtccaacgcgctg
ggaacggaggacagcgactacgacagccctgcgctgatgcagacgatggccgagcaccga
tacgacgtgcaggcggccatttacgcgcttgcgctgcatcggcttctgaaggcgcggatg
ggtagccgctatgttcccagtcgccacctgggtggcgccgcgtacctgttccttcggggg
attcacgggcctgcagggggcgtctgcacccttgaattccccgaagcactcctgaaggaa
ctggactccatgctggagcctgcgaggctgctggccgcgtga
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