Hydrogenophaga taeniospiralis: KI616_16700
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Entry
KI616_16700 CDS
T08018
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03420
Nucleotide excision repair
htn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KI616_16700
03430 Mismatch repair
KI616_16700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htn03400
]
KI616_16700
Enzymes [BR:
htn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI616_16700
DNA repair and recombination proteins [BR:
htn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KI616_16700
MMR (mismatch excision repair)
Other MMR factors
KI616_16700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UCU92476
LinkDB
All DBs
Position
complement(3502906..3505341)
Genome browser
AA seq
811 aa
AA seq
DB search
MLFEEPVASSPLLAGLNAEQGAAVTLPAEHALILAGAGSGKTRVLTTRIAWLLQTGQVTP
GGVLAVTFTNKAAKEMMTRLSAMLPINVRGMWIGTFHGLCNRFLRAHHKLANLPQTFQIL
DTQDQLSAVKRLCKQFNVDDERYPPKQVQYFISGCKEDGQRPGDVVARDEETRKKVELYA
LYEEQCQREGVVDFGELMLRSYEVLRDNDPVREHYQRRFKHILIDEFQDTNRLQYAWIKM
FSTPPLEGLTPSGNAVFAVGDDDQSIYAFRGARVGNMADFVREFRVMHQIKLEQNYRSVS
NILDSANQLISHNSNRLGKNLRTDAGAGEPVRVFEATSDFAEAQWMVDEMKQLAREDIPK
SEMAVLYRSNAQSRVVETALFNAGMPYRVYGGLRFFERAEIKHALAYLRLLENANDDTSF
LRVVNFPPRGIGARSIEQLQDMARTSGCSLHDAVSAVTGRAGAAIGAFVAKLDVLRERSV
GMTLSEIIELVLDHSGLIEHYRAEREGQDRVENLEELVSAAKSFVGIEGFGRDAVARTVD
GSPLTQSPASQGIDPALPVVDEPLAPDADTGETMSPLAAFLTHAALESGDNQAQAGQDAV
QLMTVHAAKGLEFDCVFITGMEEGLFPHENSMSDRDGLEEERRLMYVAITRARKRLYLSH
SQTRMLHGQTRYNMKSRFFEELPEACLKWLTPQQPAWNPSAAGAGGGGGWQGNRGGYGAR
GAGAPAVLQPAWSPGWASGSDPKGLGGKSNPEPDRGTDIKAGMKVFHNKFGEGKVLALEG
AGADARAQVSFTRHGVKWLALSVAKLTPVDD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgaagaacccgttgcctcctccccgctgctcgcgggcctcaatgccgaacag
ggcgccgccgtcaccttgccggccgaacacgcgctcatcctcgctggcgccggctcgggc
aagacccgtgtgctcaccacccgcatcgcctggctgctgcagaccgggcaggtgacgccc
ggcggcgtgctggccgtgaccttcaccaacaaggccgccaaggaaatgatgacgcggctg
tcggccatgctgcccatcaacgtgcgcgggatgtggatcggcaccttccacggcctgtgc
aaccgcttcctgcgcgcgcaccacaagctggccaacctgccgcagaccttccagatcctc
gacacgcaggaccagctctcggccgtcaagcgcctgtgcaaacagttcaatgtggacgac
gagcgttatccgcccaagcaggtgcagtacttcatcagcggctgcaaggaagatggccag
cgcccgggcgacgtggtggcgcgcgacgaagagacgcgcaaaaaggtcgagctgtatgcg
ctctacgaagagcagtgccagcgcgaaggcgtggtcgatttcggtgaactcatgctgcgc
tcatacgaagttctgcgcgacaacgacccggtgcgggagcactaccagcgccgcttcaaa
cacatcctgatcgacgagttccaggacaccaaccgcctgcaatacgcgtggatcaagatg
ttcagcacaccgccgctcgaagggctcacgccctcgggcaacgcggtcttcgccgtgggc
gacgacgaccagagcatctacgccttccgcggcgcgcgcgtgggcaacatggccgacttc
gtgcgcgagttccgcgtgatgcaccagatcaagctggagcagaactaccgcagcgtcagc
aacatccttgactcggccaaccagctgatcagccacaacagcaaccgcctgggcaagaac
ctgcgcaccgacgcgggcgcgggcgagccggtgcgcgtgttcgaagccaccagcgatttc
gccgaagcgcagtggatggtggacgagatgaagcagctcgcgcgagaagacattccgaag
agcgagatggccgtgctctaccgcagcaacgcgcaaagccgggtggtggagacggcgctg
ttcaacgccggcatgccttaccgcgtgtacggaggactccgcttcttcgagcgcgccgaa
atcaagcacgcgctggcctacctgcgcctgctggaaaatgccaacgacgacaccagcttt
ctgcgcgtggtgaacttcccgccgcgcggcatcggcgcgcgcagcatcgagcagctgcag
gacatggcccgcacctcgggctgttcgctgcacgacgcggtgagcgccgtcaccggccgg
gccggtgcagccattggcgccttcgtcgccaagctcgacgtgctgcgcgagcgctcggtg
ggcatgacgctgtccgagatcatcgagctggtgctggatcacagcggattgatcgaacac
taccgggccgagcgcgaagggcaggaccgggtggagaacctggaagaactggtgagcgcg
gcgaagagctttgtgggcatcgaaggctttggccgtgacgcggtggcgcgcacggtggac
ggttcgccgctgacgcagagcccggccagccagggcatagacccggcgctgccggtggtg
gacgaaccgctcgcccccgacgccgacaccggcgaaaccatgagcccgctcgcggccttc
ctcacccacgccgcgctcgaatccggcgacaaccaggcccaggccgggcaggacgcggtg
cagctcatgacggtgcacgccgccaagggcctggagtttgactgcgtcttcatcaccggc
atggaggagggcctgtttccgcacgagaactccatgagcgaccgcgacggactggaagag
gaacgccgcctgatgtatgtcgcgatcacgcgggcgcgcaagcgcctgtacctcagccac
tcgcagacgcgcatgctgcatggccagacccgctacaacatgaagagccgcttcttcgaa
gaactgcccgaggcctgcctgaagtggctcacgccgcagcagccggcctggaacccgagc
gcagctggagcgggcggtggcggtggctggcagggcaaccggggcggctacggcgcgcgc
ggagccggtgcgcccgctgtgttgcaacccgcctggtcaccgggctgggcctcgggcagc
gatccgaaaggcctgggcggcaagagcaaccccgagcccgaccgcggcaccgacatcaag
gccggcatgaaggtgttccacaacaagttcggtgaaggcaaggtgctggcgctggaaggc
gcgggcgccgatgcgcgggcccaggtcagcttcacgcggcatggcgtgaagtggttggcg
ctgtccgtcgccaagctcacgccggtggacgattga
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