Hydrogenophaga taeniospiralis: KI616_18860
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Entry
KI616_18860 CDS
T08018
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KI616_18860 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htn03019
]
KI616_18860 (pnp)
03016 Transfer RNA biogenesis [BR:
htn03016
]
KI616_18860 (pnp)
Enzymes [BR:
htn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KI616_18860 (pnp)
Messenger RNA biogenesis [BR:
htn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KI616_18860 (pnp)
Transfer RNA biogenesis [BR:
htn03016
]
Prokaryotic type
tRNA degradation factors
KI616_18860 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH_SLS1_2
OB_RRP5_4th
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UCU92869
LinkDB
All DBs
Position
complement(3953407..3955539)
Genome browser
AA seq
710 aa
AA seq
DB search
MSMFNKVTKTFQWGPHTVTMETGEIARQATGAVLVNIDDTVVLATVVAKTEAKAGQDFFP
LTVDYTEKSYAAGKIPGSFFKREGRPSELETLTCRLIDRPIRPLFPEGFYNEVQVIVHVV
SLNPEVQADIAAMIATSAALSVSGIPFNGPIGAARVGYVNGQYVLNPGQTQLKDSQLDLV
VAGTQAAVLMVESEAQQLSEEVMLGAVVFGHEQGNIAIAAINELVRDAGKPAWDWQPPAK
DEALIAKIDGLAKAKLEAAYQIRNKQARTQACRSAYADVMSALKDEGVAFDSVAIEALLF
EIEAKIVRGQILAGEPRIDGRDTRTVRAIEIRNSVLPRTHGSSLFTRGETQALVVATLGT
DRDAQRIDALAGEYEDRFMLHYNMPPFATGEAGRFGSPKRREIGHGRLAKRALIAALPSK
EDFPYTMRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKDGNRFAVL
TDILGDEDHLGDMDFKVAGTTNGISALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKTEVSNFAPKLFTMKINPEKIRDVIGKGGAVIRALTEETGTQINIDEDGTITIA
STDSAKADEAKRRIEQITAEVEIGKVYEGPVTKILDFGALINLLPGKDGLLHISQIAHER
VERVTDYLTEGQIVKVKVLETDEKGRVKLSMKALIDRNAAPAEQAQQQQQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgttcaacaaagtcacaaagaccttccagtggggcccgcacacggtcaccatg
gaaaccggcgaaatcgcccgccaggccaccggcgccgtgctggtcaacatcgacgacacc
gtggtgctcgccaccgtggtcgccaagaccgaagccaaggccggtcaggacttcttcccc
ctgacggtcgactacaccgaaaaatcgtacgccgccggcaagatccccggcagcttcttc
aagcgcgaaggccgccccagcgagctggaaacgctgacctgccgcctgatcgaccgtccg
atccgcccgctgttccctgaaggcttctacaacgaagtccaggtgatcgtgcacgtggtg
agcctgaaccccgaagtgcaggccgatatcgcggccatgatcgccacctcggccgccctg
tcggtcagcggcatcccgttcaacggccccatcggcgctgcgcgcgtgggctacgtgaac
ggccagtacgtgctcaatccgggtcagacccagctcaaggacagccagctcgacctcgtg
gtcgccggcacccaggctgccgtgctgatggtggaatccgaagcccagcaactgagcgaa
gaagtcatgctcggtgccgtggtgttcggtcacgagcagggcaacatcgccatcgctgcg
atcaacgagctggtgcgcgacgccggcaagccggcctgggactggcagccgccggccaag
gacgaggctctgatcgccaagatcgacggcctggccaaagccaagctcgaagccgcttac
cagatccgcaacaagcaggcacgcacccaggcttgccgcagcgcctacgccgacgtgatg
tcggccctgaaagacgagggcgtggctttcgacagcgtggccattgaagccctgctgttc
gagatcgaagccaagatcgttcgtggccagatcctggccggcgagccccgcatcgacggt
cgcgacacccgcaccgtgcgcgccatcgaaatccgcaacagcgtgctgccccgcacccac
ggttcatcgctgttcacgcgcggtgaaacccaggcgctggtggtggccacgctcggtacc
gaccgcgatgcccagcgcatcgacgcgctggctggcgagtacgaagaccgcttcatgctg
cactacaacatgcctccctttgccaccggcgaagccggccgttttggctcgcccaagcgc
cgcgaaatcggccacggccgcctggccaagcgcgcgctgatcgccgcgctgccgagcaag
gaagacttcccctacaccatgcgcctggtttcggaaatcaccgagtccaacggctcctcg
tcgatggcttcggtctgcggcggctgcctggcgctgatggacgctggcgtgcccatgaag
gcgcacgtggccggcatcgccatgggcctgatcaaggacggcaaccgcttcgccgtgctg
accgacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtcgccggtacc
accaacggtatctctgcattgcagatggacatcaagatccagggcatcaccaaggaaatc
atgcaggttgcactggcccaggccaaggaagcccgcatgcacatcctgggcaagatgcag
gaagccatgggcgaagccaagaccgaagtctcgaacttcgcgcccaagctcttcacgatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggcggcgccgtgatccgtgcg
ctgaccgaagaaaccggcacccagatcaacatcgacgaagacggcaccatcaccatcgct
tcgaccgacagcgccaaggccgacgaagccaagcgccgcatcgagcagatcacggccgaa
gtcgaaatcggcaaggtctacgaaggcccggtcaccaagatcctggacttcggtgcgctg
atcaacctgctgcccggcaaagacggtctgctgcacatcagccagatcgcccacgagcgc
gtcgagcgcgtgaccgactacctgaccgaaggccagatcgtcaaggtcaaggtcctggag
acggacgaaaagggtcgcgtcaagctgtccatgaaggcgctgatcgaccgcaacgctgcg
cctgccgagcaagctcagcaacagcagcaataa
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