Hydrogenophaga taeniospiralis: KI616_20660
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Entry
KI616_20660 CDS
T08018
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KI616_20660
09124 Replication and repair
03420 Nucleotide excision repair
KI616_20660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htn03021
]
KI616_20660
03036 Chromosome and associated proteins [BR:
htn03036
]
KI616_20660
03400 DNA repair and recombination proteins [BR:
htn03400
]
KI616_20660
Enzymes [BR:
htn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KI616_20660
Transcription machinery [BR:
htn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KI616_20660
Chromosome and associated proteins [BR:
htn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
KI616_20660
DNA repair and recombination proteins [BR:
htn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KI616_20660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
GlgS
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
UCU97143
LinkDB
All DBs
Position
4353568..4355862
Genome browser
AA seq
764 aa
AA seq
DB search
MGAVAVRTLCDFAARRGDLDLRFTPSPSGSEGVAGHGEVTSRRGAGYQREVPLASQWRGL
RVQGRADGWDASAQRMEEIKTHRGDAAMIADNARALHWAQARVYGWMLCEQLGLERIELV
LIYFNIDTGHETPLSETQSASALRAHFEDLCERYSGWARQERAHRTARDAALRALAFPFP
EFRAGQRALAEAVYRAHTAGRVLMAQAPTGIGKTAATLFAALKAAPAQGLDKLFYLTART
TGRQLALDALARLGAAGQASARPVLPLRVLERVARDKACEHPDKACHGESCPLARGFYDR
LPAARAAAAQAGWLDKAALRELALEHSVCPYYLGQEMLRWSDVAVGDVNHFFDIGAHWHG
LTLEHGWQSALLVDEAHNLIERARAMYSAQLDPAAFQALRRSAPAALKTGLDRLHRQWNA
LAREQTGDYTVLPEPPGAFNAALQQLCGEIGDHLALHPQDAAGGPLQTWFFDALHFQRVA
ELHGDHSLCDLTRTSHPAPGTRVAQPLISLRNLVPGPLLQDRWSAVRSATLFSATLAPMD
YVADLLGLPADTLRVDVPSPFTGEQLAVRVAPHISTRWTDRLASLTPMADTMAAQFAAEP
GNYLAFFSSFDYLAQALDRLQQRHPSIPVWAQSRGMDEPEREAFIARFTDSGQGIGFAVL
GGAFGEGIDLPGRRLIGAFIATLGLPQVNPVNEQLKARLQAKFGRGYDYTYLFPGVQKVV
QAAGRVIRSEQDHGTVWLLDDRYARAEVRRLLPAWWVVDRQPMG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ctgggcgccgtggcggtgcgcacgctgtgcgatttcgcagcgcgccggggcgacctggat
ctgcgcttcacgccctcgccttccggcagcgaaggcgtggccggccatggcgaggtgacg
tcgcgtcgcggcgcgggttaccagcgcgaagtgccgctggccagccagtggcgcggcttg
cgcgtgcagggccgggcggacggctgggacgccagcgcgcagcgcatggaagagatcaag
acgcaccgcggcgacgcggcgatgatcgcagacaacgcgcgcgcgctgcactgggcgcag
gcccgggtctacggctggatgctgtgcgaacagctcgggctggagcgcatcgagctggta
ttgatctacttcaacatcgacaccggccacgaaacgccgctgtcggaaacccagagcgcc
agcgccctgcgcgcgcacttcgaagacctgtgcgaacgttacagcggctgggcccggcag
gagcgcgcgcaccgcacggcgcgcgacgccgccttgcgcgccctggcctttccctttccc
gaattccgcgccggccagcgggcgctggccgaggccgtctaccgcgcccacacggccggc
cgcgtgctcatggcgcaggcgcccaccggcatcggcaagaccgcggccacgctcttcgcc
gcgctcaaggccgcgcccgcgcaggggctggacaaactcttctacctgaccgcgcgcacc
accggccgccagctcgcgctggacgcgctggcgcggctcggtgccgcgggccaggcgtcc
gcgcgcccggtgctgccgctgcgcgtgctcgaacgcgtggcgcgcgacaaggcctgcgaa
cacccggacaaggcctgccacggcgagtcctgcccgctcgcgcgcggcttctacgaccgc
ctgcccgcggcccgcgccgccgcggcgcaggccggctggctggacaaagccgcgctgcgc
gaactcgccctcgaacacagcgtgtgcccctactacctggggcaggagatgctgcgctgg
agcgatgtggcggtgggcgacgtgaaccacttcttcgacatcggcgcccactggcacggc
ctcacgctcgaacacggctggcagagcgcgctgctggtggacgaggcgcacaacctgatc
gaacgcgcccgcgccatgtacagcgcccagctcgacccggccgccttccaggcgctgcgc
cgcagcgcgccggccgcgctgaaaacgggcctcgaccggctgcaccgccagtggaacgcg
ctggcgcgggaacagacgggcgactacaccgtgctgcccgaaccaccgggcgcgttcaac
gccgcactgcagcagctctgcggcgagatcggcgaccacctggcgttgcacccgcaagac
gccgcgggtggcccgctgcagacctggttcttcgatgcgctgcatttccagcgcgtggcc
gagctgcacggcgaccacagcctctgcgacctcacccgcacgtcccaccctgccccgggc
acgcgcgtggcacagccgctgatcagcctgcgcaatctggtgcccggcccgctgctgcag
gaccgctggagcgccgtgcgcagcgccacgctgttctcggccacgctcgcgcccatggac
tacgtggccgacctgctgggcctgccggccgacaccctgcgcgtggacgtgccctcaccg
tttaccggcgaacagctcgcggtgcgcgtggcgccacacatctccacccgctggaccgac
cggctggcttcgctcacgcccatggccgacaccatggcggcgcagttcgcggccgagccc
ggcaactacctcgcgtttttcagcagcttcgactacctggcgcaggcgctcgaccggctg
cagcagcgccacccgtccattccggtctgggcacagtcgcgcggcatggacgagcccgag
cgcgaggctttcatcgcccgcttcaccgacagcggccagggcatcggttttgcggtgctc
ggcggtgcgttcggggaaggcatcgacctgcccgggcgccggctcatcggcgccttcatc
gccacgctgggcctgccgcaggtgaacccggtgaacgaacagctcaaggcccgcctgcag
gcgaagttcggccgcggctacgactacacctacctgttccccggcgtgcagaaggtggtg
caggccgcgggccgcgtgatccgcagcgagcaggaccacggcacggtctggctgctcgac
gaccgctacgcccgcgccgaggtgcggcggctgctgccggcgtggtgggtcgtcgaccgt
caacccatgggctga
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integrated database retrieval system
