Hydrogenophaga taeniospiralis: KI616_21015
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Entry
KI616_21015 CDS
T08018
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
htn
Hydrogenophaga taeniospiralis
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
htn01002
]
KI616_21015
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
htn01011
]
KI616_21015
Peptidases and inhibitors [BR:
htn01002
]
Cysteine peptidases
Family C82
KI616_21015
Peptidoglycan biosynthesis and degradation proteins [BR:
htn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KI616_21015
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
UCU93253
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Position
complement(4439342..4440907)
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AA seq
521 aa
AA seq
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MPTPSTVFRALLRSLALAMGVAAGGAWASEVPLWFDAGGPRPQAWQAVELLAGAPGHGLI
AEDYGVDALGLQVAEAAQAPSLDDAAQERLAQALSAAMQRYLSDLHQGRLDPRRINHHFR
PPASDGFDPAERLREGLQAGQLADVVREAAPRLSQYEALRQALARMRALGDHPAWRQELP
PLPRPARSQPGRPGKLEPGQTWAGLALLAERLRLLGDLTADEPLPVVYEGAWVEAVQRFQ
ERHGLEVDGVVGKDTWAALRVTPGERAQQIALNLERLRWTPLTEAQRMIVVNIPEFVLRA
YEVREGRIVVHHTMKIIVGKAMDTRTPVFEEEMRSIEFSPYWNVPPSIARTETVPKLQRD
PGYLAREDMEFVLPDGLVSTEVTPYVLAEVLAGRARIRQRPGPKNALGAIKFSFPNRDHI
YLHHTPAAQLFGKGRRDFSHGCVRVEQPVELALFVLQDMPQWNEQRVREAMAAGQLQAVR
LATPVPVLITYGTALVKQGRLHFYPDIYGHDRELAEALRQR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaccgtccacggttttccgcgccttgctgcgcagcctggccctggcgatgggc
gtcgcagcgggtggcgcctgggcgtccgaggtgccgttgtggttcgacgcaggcggtccc
cggccccaggcctggcaggcggtggagttgctggccggggcgcccggccatgggctgatc
gccgaagactacggcgtcgatgcgctggggctgcaggtggccgaggcggcccaggcgccg
tcgctggatgacgcggcccaggaacggctggcgcaagcgctcagcgccgccatgcagcgc
tacctgagcgacctgcaccagggtcggctggacccgcgacgcatcaaccaccacttcagg
ccaccggccagcgacggcttcgacccggcggaacggctgcgcgagggcctgcaggccggg
cagttggccgatgtggtgcgcgaagccgcgccgcgcctgtcgcagtacgaagcgctgcgc
caggcactggcccggatgcgggcgctgggtgaccaccccgcctggcggcaggagctgccc
ccgttgcctcgcccggcccgttcccagccgggccggcccggcaagctggagcccggccag
acctgggccggcctggccctgctcgccgaacggctgcgcctgctgggcgacctgacggcc
gacgaaccgctgccggtggtctacgagggtgcgtgggtggaggcggtccagcgcttccag
gagcgccacgggctggaggtggacggtgtggtcggcaaggacacctgggccgcgctgcgg
gtgacaccgggcgagcgcgcgcagcagatcgccctcaatctggagcggctgcgctggacg
ccgctgaccgaagcccagcgcatgatcgtggtcaacatcccggagttcgtgctgcgcgcc
tacgaggtccgcgagggccgcatcgtcgtccaccataccatgaagatcatcgtgggcaag
gccatggacacgcgcacgccggtgttcgaagaagagatgcgcagcatcgagttcagcccc
tactggaacgtgccgccgtcgatcgcgcgcaccgagaccgtccccaagctccagcgcgac
cccggttacctggcgcgtgaggacatggaattcgtgttgcccgacggcctcgtcagcacc
gaggtcaccccgtacgtgctggccgaggtgctggccgggcgcgcccgcatacgccagcgc
cccgggccgaagaacgcgctcggcgcgatcaagttctccttcccgaaccgcgaccacatc
tacctgcaccacacgcccgcggcccagctctttggcaagggccggcgcgacttcagccac
ggctgtgtgcgtgtcgagcagccggtggagctggccctgttcgtgttgcaggacatgccc
cagtggaacgagcagcgggtgcgcgaagccatggccgcggggcagttgcaggccgtgcgg
ctcgccacgccggtgccggtgctgatcacctatggcacggcgctggtgaaacaggggcgc
ttgcatttttaccccgacatctacggccacgaccgtgagctggccgaggccttgcgccaa
cgctag
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