Hydrogenophaga taeniospiralis: KI616_22480
Help
Entry
KI616_22480 CDS
T08018
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03410
Base excision repair
htn03430
Mismatch repair
htn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KI616_22480 (recJ)
03430 Mismatch repair
KI616_22480 (recJ)
03440 Homologous recombination
KI616_22480 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htn03400
]
KI616_22480 (recJ)
DNA repair and recombination proteins [BR:
htn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KI616_22480 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KI616_22480 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KI616_22480 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_trans_4_4
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
UCU93503
LinkDB
All DBs
Position
4756119..4757855
Genome browser
AA seq
578 aa
AA seq
DB search
MKIITRDVPPRAAWALEQGGVHPLLARLFAARGITSKEQLDDALSLLLPPASMKGAQEAA
RALADAMAANKAICIVADYDCDGATACAVGLRGLRLLGAPMGFDRVNYLVPDRVTDGYGL
TPAIAKRVKAQGADVLVTVDNGIASIDGVRAARELGLQVIVTDHHLPALKGGEVVVPADC
VIVNPNQPGCDFESKSIAGVGVMFYVLLALRAELRERGVFDAKSQPKIDTLLPLVALGTV
ADVVKLDANNRRLVAQGLKRVRAGAMPPGMAALFNVAARQPQKATSFDFGFALGPRLNAA
GRLADMTLGIECLTTDDGLRADELARTLDGINRERKAIEGEMRDQALLLAEEMFDESEEP
PPALIVFDPDFHEGVVGIVASRLKDKMHRPTFVFATSGAEGKENELKGSGRSIPGFHLRD
ALDLVAKRHPGVLLRFGGHAMAAGCTIDEEHLDIFEAALQQVAHEWLDAATLQRRMEADG
ALDKQYRRTDLVDTLHHEVWGQGFAPPVFCEELQIVSQRLVGEKHLALKMKHQGDPVDGI
WFGHTEPLPERVKLAFRLDADEWQGQRRVRFLIEAAEV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcatcacccgcgatgtaccgccccgcgccgcctgggcgctggaacaaggcggt
gtgcacccgctgctggcccgtctgtttgccgcgcgcggcatcaccagcaaggagcagctc
gacgacgcgctctcgctgctgctgccacccgcctccatgaaaggcgctcaggaagccgcc
cgcgcgctggccgacgcgatggccgcgaacaaagccatctgcatcgtggccgactacgac
tgcgacggcgccaccgcctgcgcggtcggcttgcgcggcctgcgcctgctgggcgcgccc
atgggttttgaccgcgtgaactacctggtgcccgaccgcgtgaccgacggctacggcctc
acacccgccatcgccaagcgcgtgaaagcgcagggtgccgacgtgctggtgacggtggac
aacggcatcgccagcatcgacggcgtgcgcgccgcgcgcgagctcggcctgcaggtcatc
gtgaccgaccaccacctgcccgcgctcaaaggcggcgaagtcgtggtgcccgccgactgc
gtgatcgtcaaccccaaccagccgggttgcgatttcgagagcaaatcgattgctggcgtc
ggcgtgatgttctatgtgttgctggcgctgcgcgccgaattgcgtgagcgcggcgtgttt
gatgcgaagtcacaaccgaagatcgacacgctgctgcccctcgtggcgctcggcaccgtg
gccgacgtggtgaagctcgacgccaacaaccgccgcctcgtggcgcagggcctgaagcgc
gtgcgtgccggggccatgccgccgggcatggcggcgctgttcaacgtggctgctcgtcag
ccgcaaaaagccaccagcttcgacttcggcttcgccctcggcccgcgcctgaacgctgca
ggccgcctggccgacatgacgctgggcatcgaatgcctgaccaccgacgacggtctgcgc
gccgacgaactcgcgcgcacgctcgacggcatcaaccgcgagcgcaaggcgattgaaggc
gagatgcgcgaccaggcgctgttactggccgaggagatgtttgacgaatccgaagagccg
ccgccagcgctgatcgtgttcgacccggacttccacgaaggtgtggtcggcatcgtcgcc
tcacgtctgaaggacaagatgcaccgacccaccttcgtgttcgccaccagcggcgccgag
ggcaaggaaaacgagctcaagggctcgggccgctccatccccggctttcacctgcgcgac
gccctggacctggtggccaagcggcacccgggcgtgttgttgcgctttggtggccacgcc
atggcggcaggctgcaccatcgacgaagaacacctggacatctttgaagccgcgctgcag
caagtggcccacgaatggctggacgccgccaccttgcaacgccgcatggaggccgacggc
gcgctggacaaacagtaccgccgcaccgatctggtggacacgctgcaccacgaggtgtgg
ggccagggttttgcgccgccggtgttctgcgaagagctgcagatcgtgtcccagcgtctc
gtgggcgagaagcacctggcgctgaagatgaagcaccagggcgatccggtggacggcatc
tggttcggccacaccgagccgttgcccgaacgggtgaagctggcattccggctggatgcg
gatgagtggcagggtcagcggcgcgtgcgcttcctcattgaggcggctgaggtctga
DBGET
integrated database retrieval system
