Hydrogenophaga taeniospiralis: KI616_23070
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Entry
KI616_23070 CDS
T08018
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KI616_23070 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htn03400
]
KI616_23070 (ruvB)
Enzymes [BR:
htn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI616_23070 (ruvB)
DNA repair and recombination proteins [BR:
htn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KI616_23070 (ruvB)
RecFOR pathway proteins
KI616_23070 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_14
AAA_16
Rad17
AAA_3
nSTAND3
AAA_22
RNA_helicase
AAA_18
TsaE
NTPase_1
AAA_33
Bac_DnaA
AAA_17
DUF815
ABC_tran
bpMoxR
AAA_28
GGDEF_2
Sigma54_activ_2
NB-ARC
NPHP3_N
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UCU93608
LinkDB
All DBs
Position
complement(4869832..4870890)
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AA seq
352 aa
AA seq
DB search
MTIQTDDFAPTPRVVSAAPASPKEEAIERALRPKLLDEYVGQQKVREQLEIFIGAAKKRN
EALDHVLLFGPPGLGKTTLSHIIAQELGVNLRQTSGPVLEKPKDLAALLTNLEANDVLFI
DEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLR
DRFGIVARLEFYTAEELGRIVKRSAGLLNAPMDPEGGFEIARRSRGTPRIANRLLRRVRD
YAEVKGRGTITLDMANRALAMLDVDPQGFDLMDRKLLEAVIHRFDGGPVGLDNIAASIGE
ERDTIEDVIEPYLIQQGFLQRTPRGRIATLAAYRHLGVAPPQSGDHLFPDAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatccagaccgacgatttcgctcccacgccgcgcgtggtctccgccgccccggct
tcgccgaaggaagaggcgatcgagcgcgcgctgcggcccaagctgctggacgaatacgtg
ggccagcagaaggtgcgtgagcaactggaaatcttcatcggcgcggccaaaaaacgcaac
gaggcgctggaccacgtgctgctgttcggcccgccggggctgggcaagacgacgctcagc
cacatcatcgcgcaggagctgggcgtgaacctgcgccagaccagcgggccggtgctggaa
aaacccaaggacctggcggcgctgctgaccaacctcgaggccaacgacgtgctgttcatc
gacgagatccaccggctcagcccggtcgtcgaagaaatcctctaccccgcgctggaggac
taccagatcgacatcatgatcggcgagggtccggccgcgcgcagcatcaagctggacctg
caaccgttcacgctcgtcggcgccaccacgcgcgccggcatgctgaccaacccgctgcgc
gaccgcttcggcatcgtggcgcggctggagttctacaccgccgaggagctggggcgcatc
gtcaagcgcagcgcgggcctgctgaacgcgccgatggaccccgagggtggcttcgagatc
gcgcgccgttcgcgcggcacgccgcgcatcgccaaccggctgctgcgccgcgtgcgcgac
tacgccgaggtcaagggccgcggcaccatcacgctggacatggccaaccgcgcgctggcc
atgctcgacgtcgatccgcaaggcttcgacctgatggaccgcaagctgctcgaagccgtg
atccaccgcttcgacggcgggccggtggggctggacaacatcgcggccagcatcggcgaa
gagcgcgacacgatcgaagacgtgatcgagccctacctgatccagcaggggtttctgcag
cgcacgccgcgcgggcgcatcgccacgctggcggcctaccggcacctgggtgtggcgccg
ccgcagtcgggcgatcacctgttcccggacgcgagctga
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