Hydrogenophaga taeniospiralis: KI616_24455
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Entry
KI616_24455 CDS
T08018
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn02020
Two-component system
htn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KI616_24455 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KI616_24455 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htn03021
]
KI616_24455 (rpoN)
Transcription machinery [BR:
htn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KI616_24455 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_IclR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UCU93853
LinkDB
All DBs
Position
complement(5177891..5179543)
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AA seq
550 aa
AA seq
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MKQGLSLRVSQHLALTPQLQQSIRLLQLSTLEMAQEVEQMLDENPFLERTEEIAEREAFG
LDQVDAPVSAGEQIAEAALPVADAVAAPAEYDGPLPDRVSSSSDAPADSGSGDEIESRLD
GATPVEESWEGDGTVEMAPDDSEWGGDAPARNSGSGGDDDETASAADLARSPVSLQDHLH
EQARCLRLSDEDQAALYFLIESLNDDAYLEDDLAELALGFWRLMHGREAASPGIEELEAA
EAQLRMALGWLQHMEPTGVGARNLGECLRLQIEELRNSPEARAALAICHQSMELVAKRDI
KRLCALCGIDDETARAALAIIARLEPKPGRRFIDVERNVVVPDVIVTRAGRGFKVILNPD
VMPRLRVHDVYANAMRQNRGGRDNGGEAGHAAMQQRLQEARWFIKNIQQRFDTILRVSSA
IVERQRNFFMHGELAMRPLVLREIADELGLHESTISRVTTAKYMATPFGTYELKYFFGSS
LGTETGGNASSTAVRALLKQFIASEEPKKPLSDNQLSDLLKEQGIECARRTVAKYREALR
IAPANLRKAL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaggcctgtccctgcgtgtttcgcagcacctggcgctcacgccccagttgcag
cagtcgatccggctgctgcaactctccacgctggagatggcgcaggaggtcgagcagatg
ctcgacgaaaacccgtttctggagcgcaccgaagagatcgccgagcgcgaggcgtttggt
ctggatcaggttgatgcgccggtgagcgcgggtgaacagatcgctgaagccgcgctgccg
gtggccgacgccgtggccgcgccggccgaatacgacggcccgctgcccgaccgcgtcagc
agttcgtccgacgcgcccgctgacagcggctctggcgacgagattgagagccggctcgac
ggcgccaccccggtggaagaaagctgggaaggcgacggcacggtcgagatggcgcccgac
gacagcgaatggggcggtgacgcacccgcgcgaaacagcggctcgggcggtgacgacgac
gaaaccgccagcgcagccgacctggcccgcagtcccgtcagtctgcaggaccacctgcac
gagcaggcccgctgcctgcgactgagcgacgaagaccaggccgcactgtatttcctgatc
gagtcgctcaacgacgacgcctacctggaagacgacctggccgagctcgccctgggcttc
tggcggctcatgcacggccgcgaggcggcttcacccgggatcgaagagctggaggccgct
gaagcccagctgcgcatggccctgggctggctgcagcacatggagcccactggtgtgggt
gcgcgcaacctcggcgaatgcctgcggttgcagatcgaagagctgcgcaactcccccgaa
gcgcgcgcagcgctggccatctgccaccagtccatggaactggtggccaaacgcgacatc
aagcgcctgtgtgccctgtgcggcatcgacgatgaaaccgcccgagccgcgctggcgatc
atcgcccggctggaacccaaacccgggcgccgcttcatcgatgtcgagcgcaacgtggtc
gtgcccgacgtcatcgtcacgcgcgccggccggggtttcaaggtcatcctgaatcccgac
gtgatgccgcgcctgcgcgtgcacgacgtctacgccaacgccatgaggcaaaaccgcggc
ggtcgggacaacggcggcgaagccggccacgccgccatgcagcaacggctgcaggaagcg
cgctggttcatcaagaacatccagcagcgcttcgacaccatcctgcgtgtgtcctcggcc
atcgtcgagcgccagcgcaatttcttcatgcacggcgaactcgccatgcgaccgctggtg
ctgcgcgagatcgccgacgaactcggcctgcacgagtccaccatcagccgcgtgaccacc
gccaagtacatggccacgccgttcggcacctacgaactcaagtatttcttcggctcctcg
ctcggcaccgaaaccgggggcaacgcgtccagcaccgcggtgcgcgccctgctcaagcag
ttcatcgcctccgaagagcccaagaagccgctgtccgacaaccagctctccgacctgctc
aaggagcagggcatcgaatgcgcgcgccgcactgtggccaagtaccgcgaggcgctgcgc
atcgcgccggccaatttgcgcaaagcgctgtga
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