Hydrogenophaga taeniospiralis: KI616_25435
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Entry
KI616_25435 CDS
T08018
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KI616_25435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htn03400
]
KI616_25435
Enzymes [BR:
htn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KI616_25435
DNA repair and recombination proteins [BR:
htn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KI616_25435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UCU94039
LinkDB
All DBs
Position
complement(5358507..5359421)
Genome browser
AA seq
304 aa
AA seq
DB search
MNDSTTQDPTDRPDTSFVPQLDARQRAMLAEMGVRVWAPRPPVAAQVTAPVAAEAPPAAV
ARAPAPSSMPAPAAPAARPAPVRPPVNEAVVAAPRPVAAPARPRPAGVDAMDWPALQAAV
AGCEACGLCRSRQNTVFGVGDRQADWMVIGEAPGENEDMQGEPFVGVAGQLLDNMLRAIG
RSRTGSGAQATYIANVLKCRPPANRNPLPEEVAQCEPYLARQVALVQPKIILAMGRFAVQ
SLLQTSEPIGKLRGQVHRYQGVPVIVTYHPAYLLRTPSDKAKAWADLCLALETAAASPDR
STAP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattccacaacacaggacccgaccgaccggcccgacacctcgttcgtgccgcag
ctggatgcgcgccagcgcgccatgctggccgagatgggggtgcgcgtctgggcaccccgg
ccgcccgtggccgcgcaggtcactgcgcccgtggcggccgaagcgccgcccgccgcggtg
gcgcgcgctcccgcaccttcgtcaatgccagcgcccgctgcacccgccgcccggccagcc
ccggtgcggccgccggtgaacgaagcggtggtggccgcgccccggcccgttgccgcccca
gcccgaccgcgcccggcgggtgtggacgccatggactggccggcgctgcaagccgccgtc
gcgggctgcgaagcctgcggcctgtgccgcagccgccagaacaccgtgttcggggttggc
gaccgccaggccgactggatggtgattggcgaagcgcccggtgaaaacgaggacatgcaa
ggcgaacccttcgtgggcgtggccggccagctgctcgacaacatgctgcgcgccattggc
cgcagccgcaccggcagcggtgcgcaggccacctacatcgccaacgtgctcaagtgccgc
ccgccggccaaccgcaatccgctgcccgaagaggtggcgcagtgcgagccctacctggcg
cgccaggtggcgctggtgcagccgaagatcatcctcgccatggggcgtttcgcggtgcag
tcgctgctgcagaccagcgaacccatcggcaagctgcgtgggcaggtgcaccgctaccag
ggtgtgccggtcatcgtgacctaccacccggcctacctgctgcgcacgcccagcgacaag
gccaaggcctgggccgacctgtgcctggcgctggagacagccgccgcatcacccgatcgc
tccacggccccctga
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