Halorubrum trapanicum: ACOZ36_07200
Help
Entry
ACOZ36_07200 CDS
T11980
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
htp Halorubrum trapanicum
Brite
KEGG Orthology (KO) [BR:
htp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
ACOZ36_07200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htp03019
]
ACOZ36_07200
03009 Ribosome biogenesis [BR:
htp03009
]
ACOZ36_07200
04131 Membrane trafficking [BR:
htp04131
]
ACOZ36_07200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
htp04147
]
ACOZ36_07200
Messenger RNA biogenesis [BR:
htp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
ACOZ36_07200
Ribosome biogenesis [BR:
htp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
ACOZ36_07200
Membrane trafficking [BR:
htp04131
]
SNARE
SNARE associated proteins
Others
ACOZ36_07200
Autophagy
Aggrephagy
Other aggrephagy associated proteins
ACOZ36_07200
Exosome [BR:
htp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACOZ36_07200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_5
TIP49
AAA_22
AAA_2
AAA_14
AAA_33
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
AAA_7
IstB_IS21
Mg_chelatase
AAA_25
Sigma54_activat
ATPase
ABC_tran
NB-ARC
AAA_17
DUF815
AAA_18
nSTAND_NTPase5
AAA_3
Parvo_NS1
TsaE
AAA_24
AAA_30
AAA_11
AAA_lid_PRS2_C
Zeta_toxin
SLFN-g3_helicase
NACHT
Vps4_C
PhoH
IPT
Motif
Other DBs
NCBI-ProteinID:
XRI27753
LinkDB
All DBs
Position
1445329..1447551
Genome browser
AA seq
740 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTVRVDGFTRQNADVGIGERVTIRKAEAEKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPDGVCLITEDTEVELREEPISGFE
KTGGGITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEIGVPDEV
GRKEILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
EVPPSLIDRMIVKRDDFSGALNEVEPSAMREVLVELPKISWDNVGGLEDAKQQVQESVEW
PLTSPEKFDRMGVDAPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDGLEDMGDV
MVIGATNRPDMIDPALLRSGRFDRLVMIGQPDQEGREQILDIHTEDTPLAPDVSLREVAE
ITDGYVGSDLEGIAREAAIEALRDDDDAEEVEMKHFRRAMESVRPTINDDILAYYDDVRE
QFKGGGGESLRDTGGRIGFQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaactcgaagtggcgaaggcgtacccgaacgactcggggcgcggtatc
gcccgactcgaccccgacaccctgctacatctgaagctctcgcccggcgacatcatcgag
atcgagggcgcggagacgaccgccgcgaaggtctggcgcgccgaccgccaggactggaac
accgacaccgtccgcgtcgacgggttcacccgacagaacgcggacgtcggcatcggcgag
cgcgtcaccatccggaaggcggaggcggagaaggccgacaagctcgtgctggccccgccc
gaggaggcgtcggtccagttcggctccgacgccgccggcatggtgaaacgccagatcctc
aagcgcccggtcgtcgagcgcgacatcgtccccgtgatgtcctcgaccaaccacccgttc
atgcggtcgcccggccaagcgatcccgctgatcgcggtcgagacggagcccgacggcgtc
tgtctcatcaccgaggacaccgaggtcgagctgcgcgaggagccgatctccggcttcgag
aagaccggcggcggcatcacctacgaggacatcggcgggctccagtcggagatccagcgc
gtccgcgagatggtggagctgccgatgaaacacccgcagatcttctcgaagctcgggatc
gagccgccgcagggcgtcctgctccacggcccgcccggcaccgggaagacgctcttggcg
aaggcggtcgccaacgagacctcggcgtcgttcttctcgatcgccggccccgagatcatc
tcgaagtactacggcgagtccgaacagcagctccgggagatcttcgaggacgcgaaggag
gagtcgccctcgatcatcttcatcgacgagctcgactcgatcgcgccgaaacgcgaggac
gtcaccggcgaggtcgagcgccgcgtcgtcgcccagctgctgacgatgatggacgggctc
gagacccgcgggcaggtgatcgtcatcggcgcgacgaaccgcgtcgacagcgtcgacccc
gcgctccgccgcccggggcgcttcgaccgcgagatcgagatcggcgtccccgacgaggtg
ggtcgcaaggagatcctccagatccacacccgcgggatgccgctgtcggacgacgtgagc
ctcgatcacctcgcggacgagacgcacgggttcgtcggggccgacatagagagcctcacg
aaggaggccgcgatgaaggcgctccggcgctacctcccagagatcgacctcgacgaggag
gaggtgcccccgagcctcatcgaccggatgatagtcaagcgcgacgacttctcgggcgcg
ctcaacgaggtcgagccctcggcgatgcgcgaggtgctcgtcgagctgccgaagatctcg
tgggacaacgtcggcgggctcgaagacgccaaacagcaggtccaggagtcggtggagtgg
ccgctcacctcgccggagaagttcgaccggatgggcgtcgacgcgccgaagggcgtgctg
ctgtacggcccgcccggcaccgggaagacgctgatggcgaaggccgtcgccaacgagacg
aacgcgaacttcatctcggtccgcggcccgcagctgctctcgaagtgggtcggcgagtcg
gagaaggcgatccggcagaccttccggaaggcccggcaggtgagcccgacgatcatcttc
ttcgacgagctcgacagcctcgcgccctcgcgcgggcaggagatggggaacaacgtctcc
gagcgcgtcgtcaaccagctcctcaccgaactggacggcctcgaggacatgggcgacgtg
atggtgatcggcgcgaccaaccgccccgacatgatcgatcccgcgctgctgcgttccgga
cgcttcgaccggctcgtgatgatcggtcaaccggatcaggagggccgcgagcagatcctc
gacatccacaccgaggacacgccgctcgcgcccgacgtgagcctccgcgaggtcgccgag
atcaccgacggctacgtcggctccgacttagaggggatcgcccgcgaggccgccatcgag
gcgctgcgcgacgacgacgacgccgaggaggtggaaatgaagcacttccggcgcgcgatg
gagtcggtgcggccgaccatcaacgacgacatcctcgcgtactacgacgacgtcagagag
cagttcaagggcggcggcggcgagtcgctccgcgacaccggcggccgtatcggcttccag
tga
DBGET
integrated database retrieval system
