KEGG   Halorubrum trapanicum: ACOZ36_12985
Entry
ACOZ36_12985      CDS       T11980                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
htp  Halorubrum trapanicum
Pathway
htp03030  DNA replication
htp03410  Base excision repair
htp03420  Nucleotide excision repair
htp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:htp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACOZ36_12985
   03410 Base excision repair
    ACOZ36_12985
   03420 Nucleotide excision repair
    ACOZ36_12985
   03430 Mismatch repair
    ACOZ36_12985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:htp03032]
    ACOZ36_12985
   03400 DNA repair and recombination proteins [BR:htp03400]
    ACOZ36_12985
DNA replication proteins [BR:htp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    ACOZ36_12985
DNA repair and recombination proteins [BR:htp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ACOZ36_12985
   MMR (mismatch excision repair)
    Other MMR factors
     ACOZ36_12985
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    ACOZ36_12985
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: XRI26099
LinkDB
Position
2581899..2582642
AA seq 247 aa
MFKAIVGASTFQDALDSVSVLVDECKIRLNEEELSIRAVDPANVGMVDLTLEAAAFESYD
ADGGVIGVNLARLEDIAGMANSGDLIHLELDEETRKLHIEIDGLSYTLALIDPDSIRQEP
DIPDLDLASEIVVEGAQLDRGIKAADMVSDHIRLRVDETDEAFFIEAEGDTDDVNLKLDR
EDLIALTAGPADSLFSLDYLKDMNKAIPSDAEVTVELGEEFPVKLHYGFAEGLGQATYML
APRIQSE
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggccatcgtgggcgcgtcgacgtttcaggacgcgctcgattcggtgagcgtg
ttggtcgacgagtgtaagatccgcctgaacgaggaggagctctcgatccgcgccgtcgac
cccgccaacgtcggcatggtcgacctcacgctggaggcggccgcgttcgagtcgtacgac
gccgacggcggcgtcatcggcgtcaacctcgcccgcttggaggacatcgccggcatggcc
aactcgggcgacctgatccacctcgaactcgacgaggagacccgcaagctccacatcgag
atcgacggcctctcgtacaccctcgcgctcatcgaccccgactcgatccgccaggagccg
gacatcccggacctcgacctcgcctccgagatcgtcgtcgagggcgcccagctcgaccgc
gggatcaaggccgccgacatggtctccgaccacatccgcctccgcgtcgacgagaccgac
gaggcgttcttcatcgaggccgagggcgacaccgacgacgtcaacctcaagctcgaccgc
gaggaccttatcgcgctcaccgccggccccgccgactcgctgttcagcctcgactacctg
aaggacatgaacaaggcgatcccctccgacgccgaggtcaccgtcgagctcggcgaggag
ttccccgtcaagctccactacgggttcgcggaggggctcggacaggcaacgtatatgtta
gccccccgcatccagagcgagtaa

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