Hypericibacter terrae: FRZ44_11110
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Entry
FRZ44_11110 CDS
T06396
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
htq
Hypericibacter terrae
Pathway
htq03420
Nucleotide excision repair
htq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
htq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FRZ44_11110 (uvrD)
03430 Mismatch repair
FRZ44_11110 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htq03400
]
FRZ44_11110 (uvrD)
Enzymes [BR:
htq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FRZ44_11110 (uvrD)
DNA repair and recombination proteins [BR:
htq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FRZ44_11110 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FRZ44_11110 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEX15824
UniProt:
A0A5J6MED6
LinkDB
All DBs
Position
1192015..1194357
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AA seq
780 aa
AA seq
DB search
MTSDSDSPSFEPRSAPGAGREPLYLSALNETQREAVEALDGPVLVLAGAGTGKTRVLTTR
LAHLLNTGKAGPGDLLAVTFTNKAAREMKDRVAALVHRTVEGWWLGTFHALAARILRSHA
EVVGLKPNFTILDSDDQLRLMKQIVQAADIDDKKWPPRAVLHQVERWKDRGLGPDKIGVA
EAGDFAEGKGPEIYRAYQERLKTLNAADFGDLLLHNLTIFLTRPEILERYQQRFRYILVD
EYQDTNVSQYLWLRLLAQKYRNICCVGDDDQSIYGWRGAEVGNILRFEEDFPGARIVRLE
RNYRSTQHILRAASGLIAHNEGRLGKTLWTEDDPGEKVLLRGLWDGEAEARYISDEIEAI
ERRGGSLGQIAILVRAGYQMREFEERFMTAGVPYRVVGGPRFYERQEIRDALAYLRLVHQ
PADDLAFERVVNLPRRGIGDSTLQLLHRFARANDMPLTEAALRLVGSDELKPAAKRALGR
FMEDLDRWRGFARDLSHTELAERLLDESGYTAMWQNDRSPDAAGRLENLKELVVAMAEFE
TLGGFLEHVSLVMENAATDSLEKVTLMTLHSAKGLEFDHVFLPGWEEGVFPHQRALDETG
LSGLEEERRLAYVGLTRARKRAWVSYAANRRIHNQWQSLIPSRFVDELPKDAIDRVVDPG
LYGAGRGGEETDEWSRGRLGESGGREFGRFFSGGNAGRSTVARFGSRRDAFARERSPRLI
ESASSSRSSGAFGVGDRVFHLKFGYGKVTVAEGDKLEIQFDKAGTKRVMASFVLPADQAG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgacagcgattctccctccttcgagccgcgctcggcgcctggcgccggccgt
gagccgctctatctatcggcgctcaacgagacccagcgcgaggcggtcgaggcgctcgac
ggccccgtgctggtgctggcgggcgcgggcaccggcaagacgcgggtgctgacgacgcgg
ctcgcccatctcctcaacaccggcaaggccggtccgggcgatcttctcgccgtcaccttc
accaacaaggcggcgcgcgagatgaaggaccgcgtcgcggccctggttcaccgcacggtc
gaaggctggtggctgggcaccttccacgccctggccgcgcgcattctgcgcagccatgcc
gaggtggtggggctcaagccgaacttcaccatcctcgacagcgacgaccagctgcgcctg
atgaagcagatcgtgcaggcggccgacatcgacgacaagaaatggccgccgcgcgcggtg
ctgcatcaggtcgagcgctggaaggatcggggtctcgggcccgacaagatcggcgtggcc
gaagccggcgatttcgccgaaggcaaggggcccgagatctatcgtgcctatcaggagcgc
ctcaagaccctgaacgccgccgatttcggcgacctgctcctgcataatctgacgatcttt
ctcacgcgccccgaaatcctcgaacgctatcagcagcgcttccgctacatcctggtggac
gagtatcaggacaccaacgtctcgcaatatctctggctgcggctgctggcgcagaaatat
cgcaacatctgctgtgtcggcgacgacgaccagtcgatctatggctggcgcggtgcggag
gtcggcaacatcctgcggttcgaggaggatttccccggggcccgaatcgtccggctcgaa
cgcaactaccgctcgacccagcatatcctacgcgcggcttcgggcctgatcgcgcataac
gaaggccggctcggcaagacgctctggaccgaggacgatcccggcgagaaggtgctgctg
cgcggcctttgggacggcgaggccgaggcgcgctacatctccgacgagatcgaggcgatc
gagcggcgcggcggctcgctcggccagatcgcgatcctggtgcgcgccggctatcagatg
cgcgagttcgaagagcgcttcatgaccgcgggcgtgccctatcgcgtcgtcggggggcca
cgcttctacgagcgccaggaaatccgcgacgcgctcgcctatctgcgcctggtgcatcag
ccggccgacgatcttgccttcgagcgcgtggtcaatctcccgcgccggggcatcggcgac
agcacgctgcaattgctgcatcgcttcgcgcgcgccaacgacatgccgctgaccgaggcg
gcgctgcggctggtcggcagcgacgagctcaagccggccgccaagcgcgcgctcggccgg
ttcatggaggatctcgaccgctggcgcggcttcgcgcgcgatctgtcccataccgagctg
gccgagcggctgctcgacgaatccggctataccgcgatgtggcagaacgaccgctcgccc
gacgccgccgggcgcctcgagaacctcaaggagctggtcgtcgccatggccgagttcgag
accctcggcggcttcctcgaacatgtcagcctcgtgatggagaacgccgcgaccgattcg
ctcgagaaggtcacgctcatgacgctgcacagcgccaagggcctggagttcgaccatgtg
ttcctgccgggctgggaggagggcgtgttcccgcatcagcgggccctcgacgagaccggc
ctctccgggctcgaggaggagcggcggctcgcctatgtcgggctgacccgggcgcgcaag
cgcgcctgggtctcctatgccgccaaccggcgaatccataaccagtggcagagcctgatc
ccctcgcgcttcgtggacgagttgcccaaggacgcgatcgaccgggtcgtcgatcccggt
ctctacggcgccggtcgtggcggcgaggagacggacgaatggtcgcgcggccggctcggc
gagagcggcggacgcgaattcggacgtttcttctcgggcgggaatgcggggcgctcgacc
gtcgcgcggttcggctcccggcgcgatgccttcgcgcgcgaacgctcgccgcggctgatc
gaatccgcgtcctcgtcgcgctcctcgggcgccttcggcgtcggcgaccgggtgttccat
ctgaaattcggctacggcaaggtgaccgtcgccgagggcgacaagctcgagattcagttc
gacaaggccggcaccaaacgcgtcatggcgagcttcgtcctgcccgccgaccaggcgggc
tga
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