Hypericibacter terrae: FRZ44_16090
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Entry
FRZ44_16090 CDS
T06396
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
htq
Hypericibacter terrae
Brite
KEGG Orthology (KO) [BR:
htq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
htq03016
]
FRZ44_16090 (rnd)
Enzymes [BR:
htq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FRZ44_16090 (rnd)
Transfer RNA biogenesis [BR:
htq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FRZ44_16090 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QEX16316
UniProt:
A0A5J6MNH5
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Position
complement(1737526..1738689)
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AA seq
387 aa
AA seq
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MELIADTAALAAFTERHHGAGYITVDTEFMRDRTYWPVLCLVQIAGPEDAAVIDTLAPGI
DLAPLFKLMADPAVLKVFHAARQDVEIFFHLTGQIPTPIVDTQVAAMVCGFGDAVSYENL
AGKLAGARIDKSSRFTDWSHRPLTERQLHYALSDVTHLRLAYEKLARRMEKTGRTGWVAE
EMAILTDPDTYRLVPSEAWHRLKPRSDKPRFLALLREVAAWREEEAQRRDQPRSRIAKDE
TLTEIAAHAPITPEELGRCRGLSKGFAESRQGQALLAAVKRALELPEDDLPTPPPRLDTP
PGVGPLVDLLRVLLKMRCETHQVAQKLVASASELERIAADDNAPVPAMAGWRRELFGADA
LALKHGRLALTASGKEVKIVSLPQAAQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagctcattgccgacaccgccgccctcgccgccttcaccgaacgccaccacggcgcc
ggctacatcacagtcgacaccgaattcatgcgcgaccggacctattggccggtcctgtgt
ctggtgcagatcgccggccccgaagacgcggcggtgatcgacaccctggcgccgggcatc
gacctggcgccgctgttcaagctgatggcggacccggcggtcctgaaggtgttccacgcc
gcccggcaggatgtggagatattcttccacctgaccggacagatcccgacgccgatcgtc
gatacccaggtggccgccatggtctgcggcttcggcgacgccgtttcctacgagaatctg
gccggcaagctggccggcgcccggatcgacaaatcctcgcgcttcaccgactggtcgcac
cggcctttgaccgagcgccagcttcattacgcgctcagcgacgtcacccatctgcggctg
gcctatgagaaattggcgcggcgcatggagaagaccgggcgcaccggctgggtcgccgag
gagatggcgatcctgaccgatcccgacacttatcgcctggtgccgagcgaggcctggcac
cggctgaagccgcgcagcgacaagccgcgtttcctggccctgctgcgtgaggtggccgcc
tggcgcgaagaggaggcgcagcgccgcgaccagccccgcagccggatcgccaaggacgag
accctgaccgagatcgcggcccatgccccgatcacgcccgaggaactcgggcgctgccgg
ggcctctccaagggcttcgccgaaagccgccagggccaggccctgctggcggcggtcaag
cgcgccctggagctgccggaagacgatctgcccacgcccccgccccgcctcgacacgccg
cccggcgtcggccccctggtcgatctgctccgagtgctgttgaagatgcgctgcgaaacc
caccaggtcgcccagaagctggtggcctccgccagcgagctggaacggatcgcggccgac
gacaatgcaccggttccggccatggcgggctggcggcgcgagttgttcggcgccgacgcc
ctggcgctgaagcatggcaggctggcgctgacggcctccggcaaggaggtcaagatcgtg
tccctgccgcaggcggcccaatag
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