Hypericibacter terrae: FRZ44_53730
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Entry
FRZ44_53730 CDS
T06396
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
htq
Hypericibacter terrae
Pathway
htq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRZ44_53730 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htq03019
]
FRZ44_53730 (pnp)
03016 Transfer RNA biogenesis [BR:
htq03016
]
FRZ44_53730 (pnp)
Enzymes [BR:
htq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FRZ44_53730 (pnp)
Messenger RNA biogenesis [BR:
htq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FRZ44_53730 (pnp)
Transfer RNA biogenesis [BR:
htq03016
]
Prokaryotic type
tRNA degradation factors
FRZ44_53730 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
BioW
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QEX20058
UniProt:
A0A5J6MRA9
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All DBs
Position
5864118..5866241
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AA seq
707 aa
AA seq
DB search
MFKIYRKEIEWGGRKLKLETGHIARQADGAVMATYGDTVVLCTVVGQRQPKVGVDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPSEKEVLTSRLIDRPIRPLFAEGYRNETQVVCTTLSH
DLENDPDVVAMIGASAALTISGIPFLGPIAAARVGYIDGKYVLNPRLEELKTSSLELVLA
GTTEGVLMVESEASELSEEIMLGAVTFGHAAFQPVIQAIIELAEQCAHEPWPLPEKGPEY
ETAKARLKAISGDAMRQAYEETGKQARTNKVDEVRAKAVETLVAEGFQAELVSKLLKKLE
QDIVRGAILETGKRIDGRDTKTVRQIDSEVGVLPRAHGSAVFTRGETQAFVVATLGTGED
EQIIDALEGEFREHFLLHYNFPPYSTGETGRMGSPGRREVGHGKLAWRAIHPILPKKEDF
PYTLRVVSEITESNGSSSMATVCGSSLALMDAGVPLRRPVAGIAMGLIKEKSGFAVLSDI
LGDEDHLGDMDFKVAGTTEGVTSLQMDIKITSITPEIMKIALGQARDGRLHILGEMSKAL
SRSREAVSQNAPRITVINIPKDKIREVIGSGGKVIREICEVTGAKIDIEDDGTIKVAAVD
ATAAQAAIDWIRGIVAEPEIGTVYTGKVVKIMEFGAFVNFLGTRDGLVHISELAPHRVKQ
VSDVVKVGDVVKVKCIGMDDRGKVKLSMKAVDQQTGADLSEKADASN
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaatctatcgaaaagagatcgagtggggcggccgtaagctcaagctcgagacc
ggtcatatcgcacgtcaggccgatggcgccgtcatggcgacctatggcgacaccgtcgtg
ctctgcaccgtcgtcggtcagcgccagcccaaggtcggcgtcgacttcttcccgctgacc
gtcaattaccaggagaaggctttcgccgcgggcaagatcccgggcggcttcttcaagcgc
gaaggccggccgagcgagaaggaggtgctgacctcgcgcctcatcgaccgcccgatccgc
ccgctgttcgccgagggctatcgcaacgagacccaggtggtctgcaccacgctcagccac
gacctcgagaacgatcccgatgtggtggcgatgatcggcgcctcggcggcgctgacgatc
tccggcattccgttcctcggcccgatcgcggccgcgcgcgtcggctatatcgacggcaaa
tatgtgctcaatccgcgcctcgaggagctcaagacctcgagcctcgagctggttctcgcc
ggcacgaccgaaggcgtgctgatggtcgagtccgaagccagcgagctgtcggaagagatc
atgctgggcgccgtcaccttcggccatgcggctttccagcccgtcatccaggcgatcatc
gagctcgccgagcaatgcgcccatgagccctggccgctgccggagaagggccccgaatac
gagaccgccaaggcccgcctcaaggcgatctcgggggacgcgatgcgccaggcctatgaa
gagaccggcaagcaggcgcggacgaacaaggtcgacgaagtccgcgccaaggcggtggag
accctggtggccgaaggcttccaggccgagctggtgtccaagctcctgaagaagctcgag
caggacatcgtgcgcggcgccatcctcgagaccggcaagcgcatcgacggccgcgacacc
aagactgtccgtcagatcgacagcgaagtcggcgtgctgccgcgcgcccacggctccgcg
gtcttcacccgcggcgagacgcaggccttcgtcgtcgccacgctcggcaccggcgaggac
gagcagatcatcgacgcgctcgagggcgagttccgcgagcatttcctgctgcattataac
ttcccgccctattccacgggcgagaccggccgcatgggctcgccgggccggcgcgaagtc
ggccatggcaagctcgcctggcgcgccatccatccgatcctgccgaagaaggaagacttc
ccctacacgctgcgcgtcgtgtcggagatcaccgaatcgaacggttcctcctcgatggcg
acggtctgcggttcgtcgctggcgctgatggatgcgggcgttccgctgcgccgtccggtg
gccggcatcgccatgggcctgatcaaggagaagagcggcttcgccgtcctctccgacatc
ctcggcgacgaggatcatctgggcgacatggacttcaaggtggcgggcacgaccgaaggc
gtcacctcgctgcagatggacatcaagatcacctcgatcacgcccgagatcatgaagatc
gcgctgggccaggcccgcgacggccgcctgcatatcctgggcgagatgtcgaaggcgctc
tcgcgctcgcgcgaggcggtcagccagaacgcgccgcgcatcaccgtgatcaacatcccg
aaggacaagatccgcgaagtgatcggttcgggcggcaaggtgatccgcgagatctgcgaa
gtcaccggcgccaagatcgacatcgaggacgatggcacgatcaaggtggcggcggtcgac
gccacggcggcgcaggccgcgatcgactggatccgcggcatcgtcgcggagcccgagatc
ggcacggtctacaccggcaaggtggtcaagatcatggaattcggtgccttcgtgaacttc
ctcggcacccgcgacggcctcgtccatatcagcgagctggcgcctcaccgcgtcaagcag
gtctccgatgtggtgaaggtcggcgacgtcgtgaaggtgaagtgcatcggcatggacgat
cgcggcaaggtcaagctcagcatgaaggcggtcgatcagcagaccggcgccgatctgagc
gagaaggccgacgcctcgaactga
DBGET
integrated database retrieval system
