Hydrogenovibrio thermophilus: EPV75_00550
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Entry
EPV75_00550 CDS
T05808
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
htr
Hydrogenovibrio thermophilus
Pathway
htr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
htr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EPV75_00550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htr03021
]
EPV75_00550
Transcription machinery [BR:
htr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EPV75_00550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
PhyR_sigma-like
HTH_11
DUF3939
DUF2774
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QAB14268
UniProt:
A0A451G480
LinkDB
All DBs
Position
complement(122715..123236)
Genome browser
AA seq
173 aa
AA seq
DB search
MSEELNRIPVITLYTEHQSWLQGWICHRAGCPHTAEDLTQDTFVRILRKSGQCLKCKEPR
AYLTAIAKGLLIDKWRREEIEKAYLDAISAMPEPTAPSSEHLNEIIETLLKIDQALSSLA
EKPRRAFMMAQFDGLKYREIAVKLDVSERMVKKYMAQAMMACILAADEEKAVE
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaactgaaccgcattcccgtcatcacgttatacactgagcaccaaagctgg
ctgcaaggctggatttgccatcgtgccggttgcccacataccgcagaagacctgacacag
gatacattcgtccgaattttgagaaagtccggccagtgtctgaaatgcaaagaaccccgg
gcctatctgacagccattgccaaaggccttttaatcgataaatggcgacgtgaggaaatt
gaaaaagcctatttggatgccatctcggccatgccggaacccacggccccgtcaagtgaa
cacctcaatgaaatcatcgaaaccctgctcaaaatcgatcaagccttatcgagcttagcg
gaaaaaccccgccgggctttcatgatggcgcagttcgacggtttgaaataccgtgaaatc
gccgtcaagctggacgtcagcgaacgcatggtcaagaaatacatggctcaggccatgatg
gcttgtattctcgctgcggacgaggagaaagccgttgaataa
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