Hydrogenovibrio thermophilus: EPV75_08485
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Entry
EPV75_08485 CDS
T05808
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
htr
Hydrogenovibrio thermophilus
Brite
KEGG Orthology (KO) [BR:
htr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
htr03016
]
EPV75_08485 (rnd)
Enzymes [BR:
htr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EPV75_08485 (rnd)
Transfer RNA biogenesis [BR:
htr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EPV75_08485 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QAB15700
UniProt:
A0A410H4G0
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All DBs
Position
1804820..1805968
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AA seq
382 aa
AA seq
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MTYTFIDTQADLSAFCKLIEADGWFAIDTEFVRTDTYFPKLCLIQIQSRSGHAAIIDPMA
FDALEPLWQLLENPNIRKVFHSARQDIEVLYQVSGRMPEAIYDTQIAGVFLGFGDLAGLA
KVIKAELDIELEKDQTRTDWSRRPLTDKQLEYAINDVRYLAPLYERYLDKLTEAQQAALT
EDFEALLNEDLYRLAPENAADKIKAVQKLPRKAQAIAYRLAEWRELYAINHNKPKRWVLS
DDALVAIAKRPPKAREALYKVPNIKSSSVKNFGDEWIEIIDEVFANPDAWPETANKPAPA
TPQEDIFINIGFALLQQVAQDYHINPPNIAGKTDLLHLIRHPDNTLSGWRHALFGQPFTD
FLNSKGGLAVEDNRLIQKTFIP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacctatacatttattgatacccaggcggatttatcggctttctgcaagcttatcgaa
gccgacggctggttcgccatcgacacggaattcgtgcgtaccgatacctatttcccgaaa
ctgtgcttgattcaaatccaaagccgttccggtcacgccgccatcatcgacccgatggca
ttcgacgcactcgaaccgttgtggcaattactggagaacccgaacatccgaaaggtcttc
cactccgcccgtcaggacatcgaagtattgtatcaagtttccggccggatgccggaggcg
atttacgacacccaaatcgccggtgtttttctcggattcggcgacctggcaggcctggcc
aaagtcattaaagccgaactcgatatcgaactggaaaaagaccagacccgaaccgattgg
agccgacgcccactgaccgataagcaactggaatacgccatcaacgacgtgcgttatctg
gccccgttatacgagcgctatctcgacaagctcaccgaggcgcaacaagcggccttaacc
gaagacttcgaagccctgttgaatgaggacctctaccgcctcgccccggaaaacgccgcc
gacaaaatcaaagcggtgcaaaaactgccgcgcaaagcccaggccatcgcctaccgttta
gccgaatggcgcgaactctacgccatcaatcataacaaacccaaacgttgggtgctgtcc
gacgatgcgctcgtcgccattgccaaacgcccaccgaaagcacgcgaagctctgtataaa
gtgccgaacatcaagtcgtcttcggtgaaaaatttcggtgacgaatggattgaaatcatc
gatgaggtgtttgccaatccggacgcctggcctgaaacggccaacaaaccggctccagcc
acgccccaagaagatattttcatcaatattggttttgcgttattgcaacaagtggctcag
gattaccacattaacccaccgaatattgccggaaaaacggatttgctccacctgattcgc
catccggacaacaccctttccgggtggcgtcacgccttatttggtcagccatttaccgac
tttttaaacagcaaaggcggcttggccgttgaggataaccgcctcattcaaaaaactttc
atcccataa
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