Hydrogenovibrio thermophilus: EPV75_09405
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Entry
EPV75_09405 CDS
T05808
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
htr
Hydrogenovibrio thermophilus
Pathway
htr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
htr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EPV75_09405 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htr03400
]
EPV75_09405 (uvrB)
DNA repair and recombination proteins [BR:
htr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EPV75_09405 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EPV75_09405 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
AAA_22
Kinesin
DNA_pol_A
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QAB15873
UniProt:
A0A410H4L9
LinkDB
All DBs
Position
complement(2002416..2004452)
Genome browser
AA seq
678 aa
AA seq
DB search
MAKAFEIVSSYQPAGDQPTAIAQLVEGLEDGEAFQTLLGVTGSGKTFTMANVIAQVQRPT
IILAHNKTLAAQLYGEMKSFFPHNAVEYFVSYYDYYQPEAYVPASDTYIAKDSSVNEQIE
QLRLSATKALMERNDVVLIATVSAIYGLGDPDLYLKMILQLRLGDVISQRDILERLTSMQ
YTRNDVELWRGCFRVRGDVIDVFPAEAEEYAIRIELFDDEVDSLAWFDPLTGEVLSRPTR
ITVYPKSHYVTPRERVLETIDKIKDELVVRLQELRDANKLVEAQRLEERTRLDIEMMMEL
GYCSGIENYSRYLSGRGPGEPPPTLLDYLPKNALMFIDESHVTIPQIGGMYKGDRSRKEN
LVNFGFRLPSALDNRPMRFDEFERIMPQTIFVSATPAKYEEEHQSKIVEQVVRPTGLLDP
VLEVRPALTQVDDLLGEIGLRVDKEERVLVTTLTKRMAENLTEYLEEHNVRVRYLHSDID
TVERIEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNVAGKAILYGDKITDSMQRAIDESERRRAKQIEFNEMHGITPQKLNKKVADILEDSP
YAPRAGASAAKLKAAESEGGYDTSKAKAMTPAELASAIKRLEKQMYKAAKDLDFEQAAKL
RDEIKGLKTSMVGVGDLR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcatttgaaattgtttcttcctaccagccggccggtgaccaaccgactgcc
atcgcacaattggtggagggattggaagatggtgaagcctttcaaaccctgctgggggtg
accggttccgggaagacgttcaccatggcgaatgtcattgcacaggttcagcggccaacc
attattctggcgcacaataaaaccttggcggcgcagttgtatggcgagatgaaaagtttc
ttcccgcacaatgcggtggaatatttcgtttcctactacgattattatcaaccggaagcc
tatgtgccggcttccgatacttacatcgccaaagactcctcggtgaacgaacagattgag
cagttgcggttgtccgccaccaaggcattgatggaacgcaatgacgtggtgctgatcgcg
accgtctcggcgatttacggcttgggtgatccggacctgtatttgaagatgattttgcag
ttacgtttaggcgatgtcatctcgcagcgcgatattctggaacgcttgacgagcatgcag
tacacccgtaacgacgtcgagctgtggcggggctgtttccgggtacggggcgatgtcatc
gatgtctttccggccgaggcggaagagtatgccattcgcatcgaattgttcgatgacgaa
gtcgattcgctggcctggtttgacccgttgaccggcgaagtcttgagtcgtccgacccgc
atcaccgtttatccgaaatcccattacgtgacgccgcgggaacgggtgttggaaaccatt
gacaaaatcaaggatgagctggtggtgcgtctgcaggaattgcgggacgccaacaaactc
gtcgaagcccagcgtttggaagaacgcacgcgcttggacatcgaaatgatgatggagctg
gggtattgttccggcatcgaaaactattcgcgctatctatccggtcggggcccgggcgaa
ccgccgccgactttgctggattacctgccgaaaaacgccctgatgttcatcgacgaaagc
cacgtcaccattccgcaaatcggcgggatgtataaaggggaccgttcccgtaaagagaat
ctggtcaacttcggtttccgtctgccgtcggcgttggataaccggccgatgcggttcgac
gaattcgaacgcatcatgcctcagaccattttcgtctccgccaccccggcaaagtatgag
gaagaacatcagtccaaaatcgtcgaacaggtggtgcggccgaccggtttgctggacccg
gttctggaagtgcgcccggcgcttacccaggtggacgatttgttgggcgaaattgggttg
cgggtggacaaggaggagcgggtattggtgaccaccttgaccaaacgcatggcggaaaac
cttactgaatacttggaagaacacaatgtccgggtgcggtacctgcattcggatatcgac
acggtggaacgaattgaaatcatccgcgatttgcggctgggcgaattcgatgtgttggtc
ggcatcaacctgttgcgggaagggctggatattccagaggtgtctttggtcgcaattctc
gatgccgataaagaagggttcttgcgttccgaacgatctctgattcagaccattggccgt
gcggcgcgaaacgtggccggtaaggcgattttgtatggcgataaaatcaccgattcgatg
cagcgggccattgacgaatccgaacgccgccgcgccaaacagatcgagttcaatgaaatg
cacggcatcaccccgcaaaaattgaacaaaaaagtcgcggatattttggaagattcaccg
tacgcaccgcgtgccggtgcttccgcggcgaaactgaaagcggccgagtcggagggcggt
tatgatacgtcgaaagccaaggccatgacgccggcggaattggcgtcggccatcaagcgg
ttggaaaaacagatgtacaaagcggccaaggatttggatttcgagcaggccgccaagttg
cgtgatgaaatcaaaggcttgaaaacttctatggttggcgtgggcgatttacgttag
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