Hydrogenovibrio thermophilus: EPV75_11090
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Entry
EPV75_11090 CDS
T05808
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
htr
Hydrogenovibrio thermophilus
Pathway
htr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EPV75_11090 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htr03019
]
EPV75_11090 (recQ)
03400 DNA repair and recombination proteins [BR:
htr03400
]
EPV75_11090 (recQ)
Enzymes [BR:
htr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EPV75_11090 (recQ)
Messenger RNA biogenesis [BR:
htr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EPV75_11090 (recQ)
DNA repair and recombination proteins [BR:
htr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EPV75_11090 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QAB16516
UniProt:
A0A410H6N5
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All DBs
Position
complement(2372332..2374155)
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AA seq
607 aa
AA seq
DB search
MASERANTPLGVLQSVFGYEVFRSHQADIIEDVMAGQDCFVLMPTGGGKSLCYQVPAILR
SGTAIVVSPLIALMQDQVSALKANGVKAAYYNSTLDVQTADQVLMQLHTGQLDLLYVSPE
RLFNHTFLQQLQQLPIALFAIDEAHCVSQWGHDFRPEYRQIGQLRTFFPQVPFIALTATA
DEATRQDILQRLHLQQPKVHISSFDRPNIRYTVLEKRQPMKQLLRFLEARGEVQESGIVY
CLSRKRVEEVASQLQAGGYNAQAYHAGLPGEVRHSVHQRFIRDEVDIVVATVAFGMGIDK
PNVRFVVHYDLPKNIEGYYQETGRAGRDGLASEALLLYGAQDVVTARHFVENQPDEHQRR
VEGFKLSSMVDFAESQTCRRRVLLNYFSEATDSDCGNCDICLNPPEFFDATVSAQKALSC
VYRLNQGYGLRHVVEVLRGQDNERIRQLNHQALSTYGIGREHSAAEWDSILRQLIHLGYL
LQDIQQYSVLRLTEKAGEVLKGQVCLQLAKPRNPIGKTTRPGGKQQKADLSRVELERFET
LRRLRKEIADSEERPAYQVFGDAALIEMAQRMPQTDAELLQVSGVGESKLARYGFEFLAE
LRRLQQA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgagcgtgcaaatacgccattgggcgtgttgcaaagcgttttcggttacgaa
gtgtttcgttcgcaccaggccgatatcatcgaggatgtcatggccggtcaagattgcttt
gtgctgatgccaacggggggcggaaaatccttatgttatcaagtgcccgctatcttgcga
tccgggacggccatcgtcgtgtcgccgttgattgccttgatgcaagaccaagtcagtgcc
ttgaaagccaatggcgtcaaggccgcctattacaattccacgctcgatgtccagaccgcc
gatcaggtgttgatgcagttgcacaccggacagctcgatttgctgtatgtttcgccggag
aggctgttcaaccacacgtttttgcaacagcttcagcagctccccatcgccttgttcgcc
attgacgaagcgcactgcgtgtcgcaatgggggcatgatttccggcccgaataccggcaa
atcggccagctcagaacgtttttcccgcaggtccccttcattgcgctgacagcgacggcc
gacgaagccacccgtcaggacattttgcagcggttgcatttacagcagccaaaagttcac
atcagcagtttcgaccgtccgaatattcgttataccgtgctggaaaaacgtcagccgatg
aagcagttgttacggtttttagaggcgcgcggcgaggtgcaggaaagcggtattgtctac
tgcctgagccgtaagcgggtcgaagaggtggcgtcgcaattgcaggccggcggttataac
gcgcaggcgtatcatgccggcttgccgggtgaggttcgccacagcgtgcaccagcgtttc
atccgggatgaggtggatatcgtggtggcgacggtggcgttcggcatgggcatcgataag
cccaatgtccgtttcgtggtgcattacgatttgccgaaaaacatcgaaggttattatcag
gaaaccgggcgtgccggccgggacggcctggcctccgaagccctgttgctttatggcgcg
caggatgtggtcacggcacggcattttgtcgaaaatcagccggatgagcatcagcgtcgg
gtggaaggattcaagttgagcagcatggtggattttgccgagtcgcagacctgtcgccgt
cgtgttttgttgaattatttcagcgaagccaccgacagcgattgcgggaattgcgacatt
tgtttgaacccgcccgaatttttcgatgccactgtttcggcgcaaaaagcgctttcctgt
gtttatcggttgaatcaggggtatggtttacgccatgtggtggaagtgctgcgcggccag
gacaatgaacgaatccggcaattgaaccatcaagcgctgagtacttacggcattggccgg
gagcattcggcggcggaatgggacagtattttgcggcaattgattcatttgggctacttg
ctgcaggacattcagcaatattcggtcttgcggctcaccgaaaaagccggggaggtgctg
aaagggcaggtgtgcttgcagttggccaaaccccgtaatccaatcggaaaaaccaccagg
cctggtggaaaacagcaaaaagcggatttgtcccgtgtggagctggaacgtttcgaaact
ttgcgacgcttgcgaaaagagattgccgacagtgaagaacgcccggcatatcaggtgttc
ggcgatgcggcgctcatcgagatggcgcagcggatgccgcaaacagatgccgagctgctg
caagtcagtggcgtgggtgaaagtaagttggcgcgttatggctttgagtttctggcggaa
ctccgtcgattgcaacaagcgtga
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