Hymenobacter taeanensis: HMJ29_02040
Help
Entry
HMJ29_02040 CDS
T08050
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hts
Hymenobacter taeanensis
Brite
KEGG Orthology (KO) [BR:
hts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hts03016
]
HMJ29_02040
Enzymes [BR:
hts01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HMJ29_02040
Transfer RNA biogenesis [BR:
hts03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HMJ29_02040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QJX45777
UniProt:
A0A6M6BC76
LinkDB
All DBs
Position
486558..487727
Genome browser
AA seq
389 aa
AA seq
DB search
MPNLQYLTTAAQVQQLAETLQAAPRIAIDLEFDDMRHRYGRNLALIQLFDGQSAFLLDPL
PLTNPAHDLEPLWAILRDPAVEKIFHSCKSDILLLDELYSVHVRNITDTSVQYTLLAEAD
NNISLGRLIQAELGIEVDKGEQKSNWLKRPLTDAQKEYAANDVIYLFELADRLSAKLAAL
GRTEWAEQENAALEEVRYVRDERPYMRNAGKYRIMPNELPLFRDLYMLRDQIARDLDRPP
YMIFANDRLAELVRDTPRNLNDWKAARGLHPELKRTPYLDQLVALSPDNFVSRPEPPLSG
EQRRFPFRRRLTGDKAAQADAREQLLTQLKNHITTDANGFVANLVLSNRLIADIVEQGAE
QSLRPWQKTILRETAERHGLDYNQIAKPF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaccttcaatacctgactactgccgcgcaggtgcaacagcttgccgaaacgttg
caagcagccccccgcattgccatcgatctggaattcgacgacatgcgtcaccgctacggt
cgtaacctagccctcatccagctatttgacggtcagagcgctttcttgcttgatccgctc
ccgctcactaacccagcccatgatctggaacccttatgggcaattttgcgcgaccccgca
gtagagaagatctttcacagctgcaaatctgatatcctcctgctagatgaattgtacagt
gtgcacgttcgtaacatcactgatactagtgtgcagtacaccctgctggccgaggccgat
aacaatatctccctgggccgtttgattcaggctgagctaggcattgaggtagataagggc
gagcaaaagtcaaactggctgaagcgcccccttaccgatgctcagaaggagtacgcagcc
aatgatgtaatttatctgtttgagttagccgaccgcctcagtgccaagctggcagcttta
ggccgcacggagtgggcagagcaggagaatgccgctttagaagaggtgcgctacgtgcgc
gacgagcggccctatatgcgcaatgctggtaaataccgcattatgccgaatgagctgcct
ctgtttcgtgacctatatatgctgcgcgaccaaattgcgcgcgacctggaccggccgcca
tacatgatcttcgccaacgaccgcctagctgagctggtgcgcgataccccgcgcaacctt
aatgactggaaggcagcgagaggcctacacccggaactcaagcgtactccttacctagac
cagcttgtagcactgtcgcccgacaactttgtttcccggcccgagccacctctatctggc
gagcagcgccgctttcctttccgccgccgccttaccggtgacaaagcggcccaggctgat
gcccgcgagcaattgctcacgcagcttaaaaatcacatcaccaccgatgcaaatgggttt
gtagctaacctggtgctttcaaaccgcctcattgcagatatagtagagcaaggcgctgag
cagtcgttgcggccgtggcagaagaccattctgcgcgaaactgctgagcggcatggccta
gattacaaccagattgccaagccgttctag
DBGET
integrated database retrieval system
