KEGG   Hymenobacter taeanensis: HMJ29_03155
Entry
HMJ29_03155       CDS       T08050                                 
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
hts  Hymenobacter taeanensis
Pathway
hts03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hts00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HMJ29_03155 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hts03019]
    HMJ29_03155 (recQ)
   03400 DNA repair and recombination proteins [BR:hts03400]
    HMJ29_03155 (recQ)
Enzymes [BR:hts01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HMJ29_03155 (recQ)
Messenger RNA biogenesis [BR:hts03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     HMJ29_03155 (recQ)
DNA repair and recombination proteins [BR:hts03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HMJ29_03155 (recQ)
SSDB
Motif
Pfam: DEAD RQC RecQ-1-like_HTH Helicase_C HRDC RecQ_Zn_bind ResIII HTH_40 Helicase_Sgs1
Other DBs
NCBI-ProteinID: QJX49154
UniProt: A0A6M6BMV4
LinkDB
Position
753240..755441
AA seq 733 aa
MPAAVKIQVKQEADLKGKLKEVFGYGQFRGVQEDIIQNVIRGNNTFVIMPTGAGKSLCYQ
LPALVLPGTAIVISPLIALMKNQVDQLNAFGVNAQFLNSTLSKSEMNKVKKDVISGEVKL
LYVAPESLTKEETIEFLQKATISFVAIDEAHCISEWGHDFRPEYRKIRSIIDGLGVQVPV
IALTATATPKVQQDIQKNLQMDDASVFKTSFNRTNLYYEVRPKHNTKKQLIQYVKQRKGL
AGIVYCLSRKKVEEIAELLRVNDVRALPYHAGLDPHVRMANQDAFLNEDCDVIVATIAFG
MGIDKPDVRFVIHFDTPKSIEGYYQETGRGGRDGLEGDCLMFYSYDDIVKLEKFNKDKPV
TERDNSKLLLQEMANYADSAVCRRKQLLHYFGESYPTDCGFCDNCKHPRARFEAKNEVVM
ALKAVVQTEERFGLDHIGTVLMGMNNPHVESYGHDQLPVYGQGKDHDAQFWHSLLRQVLL
AGYLEKDIENFGVIKISQKGIDFIENPHSIKLTQDHNYEEEVKEEQEQEEVQQAAGHDET
LFEMLKALRKKIAQQKNLPPYVLFQDPSLKEMATTFPVKMEDLAHVGGVGQGKAQKFGAP
FLALIQKYVDENDIITAADVVVKSAVNKSKIKIYIIQQIDKKMDLEEIASSKGIDMRELM
EEIEHICYSGTKLNLDYYIDGVLDQDRQEEITEYFLQASTDNIAVALKELGSDDYTEEDL
RLMRIKFLSEYAN
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgccagccgccgtgaaaattcaagtgaagcaagaggctgatctgaaaggcaagttaaag
gaagtttttgggtacggtcagttccggggcgtgcaggaggatattatccaaaacgtcatc
cgaggcaacaataccttcgtgattatgcccactggggcaggcaagagcttgtgctatcag
ctcccggccttggtgttgcctggcacggccatcgtgatttcaccgcttatcgccctgatg
aagaaccaggtagatcagctaaatgcgtttggggtaaatgctcagtttctgaactcgacc
ttgtcgaagtcagaaatgaacaaggtgaagaaggacgttatcagcggcgaggtaaagctg
ctgtacgtggcgccggagtcgctgaccaaggaagaaaccattgagtttctgcagaaggct
actatctcctttgtggctattgacgaagctcactgcatctcggagtggggccacgacttc
cgtcccgagtaccgcaagattcgcagcattattgacggcctgggcgtgcaggtgccggtt
attgccctcacggccaccgcaacgcccaaggtgcagcaggatattcagaaaaacctgcag
atggacgacgcctcggtgttcaagacctcgttcaaccgcaccaacctctattacgaggtg
cgccccaagcacaacaccaagaagcagctgattcagtacgtgaagcagcgcaagggttta
gcgggcattgtgtattgcctgagccgcaagaaagtagaggaaattgcggagctgctgcgc
gtgaatgacgtgcgggccctcccctaccacgccggccttgacccgcacgtgcgcatggct
aaccaagacgccttcctgaacgaagactgcgacgttattgtggccactattgcctttggg
atgggcattgataagcccgatgtgcggttcgtgattcactttgacacgcccaagagcatt
gagggatactaccaagaaaccggccgcggcggccgcgacggcctggagggcgactgcctg
atgttctacagctacgacgacattgtaaagctggagaaatttaacaaagacaagcccgta
accgagcgcgataactccaagctgttgctgcaggagatggccaactacgccgactcggca
gtgtgccgccgtaagcagctgctgcattactttggcgagagctatcctaccgactgcggt
ttctgcgacaactgcaaacaccccagggcccgttttgaggccaagaacgaggtggtaatg
gcccttaaagccgtagtgcagacggaggagcgctttggcctcgaccatattggaacggtg
ttgatggggatgaataacccccacgtggagagctatggccacgaccagctaccggtatat
ggccagggcaaggaccacgatgctcagttctggcactctttattgcgccaagtactgctg
gcaggatacctggaaaaggatatcgagaattttggcgtaattaagatctcgcagaagggt
atcgactttattgagaacccacattcgatcaagctcactcaggaccacaactacgaggaa
gaggtgaaagaagaacaggaacaagaagaagtccagcaggcagcgggccacgacgagacg
ctgttcgagatgctgaaggcgctgcgcaagaaaattgctcagcagaagaacctgcccccc
tacgttctcttccaagacccgtccttgaaagagatggctactaccttccccgtgaagatg
gaagacctggctcacgtaggtggcgtaggccagggaaaagcccagaagtttggggcgccc
ttcctagctctcatccagaaatacgtggatgaaaatgacattataacagccgccgatgtg
gtagtaaaatcggccgttaataagtctaaaatcaagatctacatcattcagcagatcgat
aagaaaatggacctggaggaaattgcttcttctaagggcattgatatgcgggagctgatg
gaggagattgagcacatctgctactcgggcaccaagctcaacctcgattactatattgat
ggggtgctggaccaagaccgccaggaagaaattaccgaatactttttgcaagccagtacc
gataatattgcggtagccctgaaagagctgggctctgatgactacaccgaggaagatttg
cgtttgatgcgcattaaattcctgagcgaatacgctaactaa

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