Hymenobacter taeanensis: HMJ29_06355
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Entry
HMJ29_06355 CDS
T08050
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hts
Hymenobacter taeanensis
Pathway
hts02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hts00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HMJ29_06355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hts03021
]
HMJ29_06355
Transcription machinery [BR:
hts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HMJ29_06355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
Sigma70_r2
Sigma70_r4
HTH_5
GerE
UPF0122
HTH_40
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QJX46579
UniProt:
A0A6M6BF49
LinkDB
All DBs
Position
1483883..1484461
Genome browser
AA seq
192 aa
AA seq
DB search
MYASYSEATLLDALRAGDEGAFAEMYKRYSFRLFTVAYQKLKSREAAEELVQDLFENLWT
RRATIQVEQLDHYLFSAIKYRIINYIKTQKLRAGYQLYMQVSVSEKNTETEEALALNDLT
AALLAGMQDLPEKSREIFQLSRFEHYSVSEISGHINLSEKTVEYHLTKSLKLLRRYLRDF
LLAVLPILFLLK
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcttcttactcagaggccaccctgctcgacgctctacgagcgggcgatgaaggg
gcctttgcggagatgtataagcgctacagcttccgcctgtttacagtggcttaccagaag
ctgaaaagccgtgaagcagccgaggagttggtgcaggacttgttcgagaacctctggacg
cggcgggctaccatacaggtagagcagctcgaccactacctgttttcggctatcaagtac
cgcatcatcaactacatcaaaacgcagaagctgcgcgcgggctaccagctatacatgcag
gtaagcgtttcggaaaagaacacggaaaccgaagaggcgctggccttgaatgacctgacg
gcagcattgctggccggaatgcaagacctgcccgagaagtcgcgggagatttttcaactc
agccggtttgagcattatagcgtgtcggaaatctccgggcatattaatctatctgagaaa
acggtggagtatcaccttaccaaatccctcaaactattgcggcgctacctgcgggatttc
ttgcttgcagtgctgccgatactgtttttattgaaatag
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