Hymenobacter taeanensis: HMJ29_08655
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Entry
HMJ29_08655 CDS
T08050
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
hts
Hymenobacter taeanensis
Brite
KEGG Orthology (KO) [BR:
hts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hts03000
]
HMJ29_08655
Transcription factors [BR:
hts03000
]
Prokaryotic type
Helix-turn-helix
Other families
HMJ29_08655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
GAF_3
AAA_5
HTH_8
AAA
AAA_2
Mg_chelatase
AAA_3
AAA_16
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
QJX47000
UniProt:
A0A6M6BG59
LinkDB
All DBs
Position
complement(2022614..2024716)
Genome browser
AA seq
700 aa
AA seq
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MPDQDDSLLLYLNDAIATTRNKEDLFRNVTEKLRLIFPFDAITILSLDMEHQYRRVFLRD
YLGDVIIPDISNHKYHRAAIERTPIEGFVRQTHIQHYNLEQLLQEYGSFQPFHALLNQGM
RYLTVVPLRTGGRLIGLLSLVARRQPDLSEQDADLLEKIGSLVAVAVTNALAFEDIARRE
QEKTMQLALNNALLSIKERGELFRAIATEINQVVSYDYFGVRIRQPDSPVRALAEFSKQP
DGSFLALDENRFDDLPQSEASKQAVLDLFSKPGVYVGADFEALARRYDMLRYIREQRGTQ
SILCAPLDSGDESSAVVILASYQPLAFREETLQLLLTLVPQIRLAIQNVLAFEQIDLLRT
QLERERTYLIDEINTTAAARLDDFVGGSAVMQQVYTRLAQVAPTDTTVLIEGETGTGKEL
VARALHNLSPRAERALIKLNCAALPAQLIESELFGHEKGAFTGAHDRRIGKFELADGGTI
FLDEVGELPLDLQAKLLRVLQEKEFERIGGRRVISSNVRVIAATNRVLEEEVAAGRFRAD
LYYRLNVFPIRLPALRERPEDIEPLMRHFLERFTKQMGKPVRGLRERDLRAMQQYGWPGN
VRELEHVLEQAVIVSQGPFLEFAGFSAVAQAAQAPTATPEAGGPIKTLKDQERDHILAAL
RRTGGRVSGPTGAAVLLDINPKTLEARMKKLGIQRTITAG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcaggacgactctttactcctatacctcaacgacgctattgccactacccgc
aataaggaggacttgtttaggaacgtgaccgagaaattgcggctgatttttccttttgat
gccattaccattctgtcgctggatatggagcaccagtaccggcgcgtgtttctgcgtgat
tacctcggggatgtcatcatcccggacatatcaaaccataaataccaccgtgctgcaatt
gaaaggacgccaattgaagggtttgttcgtcagacccatatccagcattacaatctggaa
cagctgctgcaagaatacggtagctttcagccctttcacgcgctgctgaaccagggtatg
cgctacctcacggtggtgccgctgcgcacgggtggccgcctgattgggttgctttccttg
gtggctcggcgccagccagacctctcagagcaggatgctgatttgctggagaagatagga
agcctggtggccgtagccgttaccaatgcgctggcctttgaggatattgcccgccgcgag
caggaaaaaaccatgcagctggcccttaataatgcgctgcttagcattaaagagcgaggc
gagctgtttcgggctattgccacggaaatcaaccaagtggtatcctatgactatttcggg
gtgcggatccgtcagcccgattcgccggtgcgggcactggcagagttcagcaagcagcca
gacggctcctttctcgccctggatgaaaaccgttttgatgacctgccacaatcagaggcc
agcaagcaggccgttctggaccttttctccaaaccaggagtgtatgtaggggctgatttt
gaggccctggcccgccgttacgacatgctgcgctatatccgtgagcagcgtggcacgcaa
tccatcctctgcgcgccccttgactccggcgacgaatcatcggcggtagttattctggct
agctatcagccgcttgccttcagggaagaaacattgcaactgctcctaaccctggtgcct
cagatccggctggccattcagaacgtgctagccttcgagcaaattgacttgctccgcact
cagctggagcgggagcgcacctatctcatcgacgaaatcaacaccacggccgcggcccgc
ctcgatgactttgtgggcggcagcgccgtgatgcagcaggtatacacccggctggcccag
gtagcccccaccgataccaccgtgctgattgaaggtgaaacgggtaccggtaaggagctg
gtagccagggccctgcacaacctgtcgcccagggccgagcgggccctgattaagctaaac
tgtgctgcgctgccggctcagctcattgagagcgagctgtttggccacgagaagggcgcc
ttcaccggggcccacgaccggcgcattggcaaatttgagctggctgatgggggcaccatt
ttcctggatgaggtgggcgaactgcccttggatttgcaggccaagctgctgcgggtgctg
caggagaaggaatttgaacgcattggcgggcggcgcgttatttccagcaacgtgcgggtt
attgcagccaccaaccgcgtgctggaggaggaggtagcggctggtcgtttccgcgccgac
ctctactatcgcctcaacgtgttccctattcggctgcctgccctgcgtgagcggcccgag
gatattgagccgctgatgcgccactttctggagcgcttcaccaagcagatgggcaagcct
gtacgtggcctacgtgagcgggacctgcgggccatgcagcaatacggctggcccggcaac
gtgcgcgagctggagcacgtgctggagcaggccgtaattgtgagccagggccctttcttg
gaatttgcgggcttctcggcggtagcccaggcggcgcaggcacctacggccaccccagag
gctggcggacccatcaaaaccctgaaagatcaggagcgcgaccacatattagcggccctg
cgccgcacgggcggccgggtaagtggtcctaccggggccgccgtgctgctcgatatcaac
cccaaaaccctggaggcccgcatgaagaagctgggcattcagcgcaccatcacggcgggg
tga
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