KEGG   Hymenobacter taeanensis: HMJ29_10735
Entry
HMJ29_10735       CDS       T08050                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
hts  Hymenobacter taeanensis
Pathway
hts03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hts00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HMJ29_10735 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hts03019]
    HMJ29_10735 (rny)
Messenger RNA biogenesis [BR:hts03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HMJ29_10735 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD YtxH KH_KhpA-B DUF4954 NttC KH_2
Other DBs
NCBI-ProteinID: QJX47388
UniProt: A0A6M6BHK9
LinkDB
Position
2521943..2523640
AA seq 565 aa
MSTSVYIALAAVLALVVGIVVGRLLAGKARQDHEADAKARAQQILQDAEVQATRTRDERI
QQSKDKFRNLKQEFEQESRRQKQALEQELTDRRAAVVEQEQSIKQLTLTTQKQLEQIQRK
EKDLEATRERIEAQAQQQREKLEAQEEKRRTVLENQLAKLEQREQEVEQELEERTQDLKA
KREQVLQQLEAISGLTAAEAREQLVESLKNEAQIQASSYIKDVVAQAKLTATKDAKKVVL
ETIQRTAAEHAIENCVSVFNIESDDVKGKIIGREGRNIRALEAATGVEIIVDDTPEAIII
SGFDPVRREVARLSLHLLVKDGRIHPARIEEIVAKTRKNIDEEIVEIGEKTIIDLGIHGL
HPELIKMVGRMRFRSSYGQNLLQHSREVANLCATMAAELGLNVKHAKRAGLLHDIGKVST
EEPELPHAILGMEMAKKYKEHPDVVNAIGAHHDEIEMTAMISPLVQACDAISGSRPGARR
EMMESYIKRLKQLEETANGFKGVNQCFAIQAGRELRVMVDAENVTDERAAELSYEISQKI
EKEMQYPGQIKITVIREMRAVAYAK
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgtccacctctgtttatattgctcttgctgctgtgctggcccttgtggtcggcatcgtg
gtggggcgcctgctggccggaaaggcccggcaggaccacgaagccgacgccaaagcccgg
gcccagcagattctgcaggatgccgaagtacaggctacccgtacccgcgacgagcggatt
cagcaatcgaaggataaattccgcaacctaaagcaggagtttgagcaagagagccgccgc
cagaagcaggccctggagcaggaactgaccgaccgccgcgccgccgtagtagagcaggag
caaagcatcaagcagcttaccctcactacccaaaagcagctggagcagattcagcgcaag
gagaaggacctcgaagccacccgcgagcgaattgaagcgcaggctcagcagcaacgcgaa
aagctggaagcgcaggaagaaaagcgccgcaccgtactcgaaaaccaactggccaagcta
gagcagcgcgagcaggaagtagagcaggaattggaagagcgcacccaggacctgaaagcc
aagcgggagcaggtattacagcagcttgaagccatttcgggcttaacggccgctgaagcc
cgtgagcaattagtggagtcgctcaagaatgaggcccagattcaggcttcatcctacatc
aaagatgtagtagcccaagctaaactcactgctactaaagacgctaaaaaagtagtgctg
gaaaccattcagcgcacggccgccgagcacgccattgaaaactgcgtctcggtatttaac
atcgaatctgacgacgttaagggcaagattattggccgcgagggccgcaacatccgggcg
ctggaagccgcaaccggcgttgaaatcattgtggatgacacgcccgaagctatcatcatc
tcgggcttcgacccggtgcgccgcgaggtggcccgcctaagcctacacttattggtgaag
gacggccgtattcaccccgcccgcatcgaggagattgtggccaaaacccgcaagaacatc
gacgaggaaattgtggaaatcggagagaagaccatcatcgacctcggtattcatggcttg
caccccgagctgatcaaaatggtgggtcggatgcgtttccgctcctcgtatggccagaac
ttgctgcaacactcgcgcgaagtagctaacctctgcgccactatggccgccgagctaggc
ctcaacgtgaagcacgccaagcgcgccggcctcctccacgacatcggcaaggtaagcacc
gaagagcctgagctgccccacgccatcctaggcatggagatggccaagaagtacaaggag
caccccgacgtggtaaacgccatcggtgcccaccacgacgaaatcgagatgacggccatg
atttcgccgctggtgcaggcctgcgacgccatttccggctctaggccaggtgcccgccgc
gagatgatggaaagctacatcaagcgcctgaagcagttggaagaaaccgctaacggcttt
aaaggtgtaaatcagtgcttcgccattcaggccggccgcgagctgcgcgtaatggtagac
gccgagaacgttactgacgagcgcgctgccgagctgagctacgagatttcgcagaagatc
gagaaggaaatgcagtaccccggccaaatcaaaatcacggttattcgggagatgcgcgcc
gtggcctacgccaagtaa

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