Hymenobacter taeanensis: HMJ29_10735
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Entry
HMJ29_10735 CDS
T08050
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hts
Hymenobacter taeanensis
Pathway
hts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMJ29_10735 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hts03019
]
HMJ29_10735 (rny)
Messenger RNA biogenesis [BR:
hts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMJ29_10735 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
YtxH
KH_KhpA-B
DUF4954
NttC
KH_2
Motif
Other DBs
NCBI-ProteinID:
QJX47388
UniProt:
A0A6M6BHK9
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Position
2521943..2523640
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AA seq
565 aa
AA seq
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MSTSVYIALAAVLALVVGIVVGRLLAGKARQDHEADAKARAQQILQDAEVQATRTRDERI
QQSKDKFRNLKQEFEQESRRQKQALEQELTDRRAAVVEQEQSIKQLTLTTQKQLEQIQRK
EKDLEATRERIEAQAQQQREKLEAQEEKRRTVLENQLAKLEQREQEVEQELEERTQDLKA
KREQVLQQLEAISGLTAAEAREQLVESLKNEAQIQASSYIKDVVAQAKLTATKDAKKVVL
ETIQRTAAEHAIENCVSVFNIESDDVKGKIIGREGRNIRALEAATGVEIIVDDTPEAIII
SGFDPVRREVARLSLHLLVKDGRIHPARIEEIVAKTRKNIDEEIVEIGEKTIIDLGIHGL
HPELIKMVGRMRFRSSYGQNLLQHSREVANLCATMAAELGLNVKHAKRAGLLHDIGKVST
EEPELPHAILGMEMAKKYKEHPDVVNAIGAHHDEIEMTAMISPLVQACDAISGSRPGARR
EMMESYIKRLKQLEETANGFKGVNQCFAIQAGRELRVMVDAENVTDERAAELSYEISQKI
EKEMQYPGQIKITVIREMRAVAYAK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctctgtttatattgctcttgctgctgtgctggcccttgtggtcggcatcgtg
gtggggcgcctgctggccggaaaggcccggcaggaccacgaagccgacgccaaagcccgg
gcccagcagattctgcaggatgccgaagtacaggctacccgtacccgcgacgagcggatt
cagcaatcgaaggataaattccgcaacctaaagcaggagtttgagcaagagagccgccgc
cagaagcaggccctggagcaggaactgaccgaccgccgcgccgccgtagtagagcaggag
caaagcatcaagcagcttaccctcactacccaaaagcagctggagcagattcagcgcaag
gagaaggacctcgaagccacccgcgagcgaattgaagcgcaggctcagcagcaacgcgaa
aagctggaagcgcaggaagaaaagcgccgcaccgtactcgaaaaccaactggccaagcta
gagcagcgcgagcaggaagtagagcaggaattggaagagcgcacccaggacctgaaagcc
aagcgggagcaggtattacagcagcttgaagccatttcgggcttaacggccgctgaagcc
cgtgagcaattagtggagtcgctcaagaatgaggcccagattcaggcttcatcctacatc
aaagatgtagtagcccaagctaaactcactgctactaaagacgctaaaaaagtagtgctg
gaaaccattcagcgcacggccgccgagcacgccattgaaaactgcgtctcggtatttaac
atcgaatctgacgacgttaagggcaagattattggccgcgagggccgcaacatccgggcg
ctggaagccgcaaccggcgttgaaatcattgtggatgacacgcccgaagctatcatcatc
tcgggcttcgacccggtgcgccgcgaggtggcccgcctaagcctacacttattggtgaag
gacggccgtattcaccccgcccgcatcgaggagattgtggccaaaacccgcaagaacatc
gacgaggaaattgtggaaatcggagagaagaccatcatcgacctcggtattcatggcttg
caccccgagctgatcaaaatggtgggtcggatgcgtttccgctcctcgtatggccagaac
ttgctgcaacactcgcgcgaagtagctaacctctgcgccactatggccgccgagctaggc
ctcaacgtgaagcacgccaagcgcgccggcctcctccacgacatcggcaaggtaagcacc
gaagagcctgagctgccccacgccatcctaggcatggagatggccaagaagtacaaggag
caccccgacgtggtaaacgccatcggtgcccaccacgacgaaatcgagatgacggccatg
atttcgccgctggtgcaggcctgcgacgccatttccggctctaggccaggtgcccgccgc
gagatgatggaaagctacatcaagcgcctgaagcagttggaagaaaccgctaacggcttt
aaaggtgtaaatcagtgcttcgccattcaggccggccgcgagctgcgcgtaatggtagac
gccgagaacgttactgacgagcgcgctgccgagctgagctacgagatttcgcagaagatc
gagaaggaaatgcagtaccccggccaaatcaaaatcacggttattcgggagatgcgcgcc
gtggcctacgccaagtaa
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