Hymenobacter taeanensis: HMJ29_15780
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Entry
HMJ29_15780 CDS
T08050
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hts
Hymenobacter taeanensis
Brite
KEGG Orthology (KO) [BR:
hts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hts03032
]
HMJ29_15780 (topA)
03400 DNA repair and recombination proteins [BR:
hts03400
]
HMJ29_15780 (topA)
Enzymes [BR:
hts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HMJ29_15780 (topA)
DNA replication proteins [BR:
hts03032
]
Prokaryotic type
DNA Topoisomerases
HMJ29_15780 (topA)
DNA repair and recombination proteins [BR:
hts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMJ29_15780 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QJX48302
UniProt:
A0A6M6BJS1
LinkDB
All DBs
Position
complement(3769676..3772159)
Genome browser
AA seq
827 aa
AA seq
DB search
MVKNLVIVESPAKAKTIEGYLGKDFIVKSSFGHVRDLPKDNNAIDIANGFKPTYVVSADK
REIISQLKKLAKEAEMVWLASDDDREGEAISWHLSETLNLSNDKTRRIVFREITKNAILH
AIDTPREINLDLVNAQQARRVLDRLVGFELSPVLWKKVKAGLSAGRVQSVAVRLVVERER
EINQFKTSSAYRVVAKFDAGRGAVLEAELPTRFKTNDEAQAFLERCIGASYSIENLEKKP
GKRSPAPPFTTSTLQQEASRKLGFSVAQTMSVAQKLYEAGKISYMRTDSVNLSQDALAAA
KDEISRSYGPEYAQTRQFKTKSASAQEAHEAIRPTDFSLVKAGSDSQEQRLYDLIRKRAM
ASQMADAVIERTVASISISTQPGTMLTATGEVITFEGFLKAYSESKDEEVQDETPTESTF
SRGLPPLSVGQALPLQQLRATERFASPAARYTEASLVKKMEEMGIGRPSTYAPTISTIQK
RGYVEKDSREGKERKFRVLTLEGETVNTEVKTETYGADKAKLFPTDTAMVVNDFLVEHFP
VIVDYQFTAKVEDEFDQIANGHEQWTDMLAGFYGTFHETVERGQDIERSTLGSTRVIGTH
PETGQKLTARLGRFGPYVQIEPLEGSEEKAVYASLRKGQFIENITLEEALDLFKLPRIVG
QFEDKDMTAALGRFGPYIRHDSKFYSLTKEQDPHTITAQEAIDLIEAKRKADAERLIKDF
PENPEVQVLNGRFGPYIVAGKKNVKIPKGEEPAALTLERCLELAAATPDKPAKGGRFGAK
KAPATSAEDAADKPAKKAPAAKKTAAKKPAAKKATGTATKKAATKAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaaatttagtcatagtagagtccccggccaaggccaaaaccattgaaggttac
ctgggcaaggacttcatagtcaaatctagtttcggccacgtccgcgacttacccaaggat
aataatgccattgatattgccaatgggtttaaacctacgtacgtcgtttcagctgataag
cgggaaataatcagccagctgaagaagctagcgaaggaggccgaaatggtttggctagct
agtgacgatgaccgtgaaggggaagccatttcgtggcacttgtcggaaacgcttaacctg
agcaacgacaagacccgccgcattgtgttccgggaaatcaccaagaacgctattctgcat
gctattgacacgccccgggaaattaacctggatctagtgaatgcgcagcaggctcgccgg
gtgcttgaccgcttagtgggctttgagctttcgccggtactctggaagaaagtgaaggcc
gggctttcggcggggcgggtacaatcggttgcggtacgcctagtggtggagcgtgagcga
gaaatcaaccagtttaaaacttcctctgcttaccgcgttgtggccaagtttgatgctggc
cgaggcgcagtactggaggcggaactgcccactcgttttaagaccaatgatgaagcacag
gctttcctagagcgctgcataggtgcttcctattcaattgagaacctggagaagaagccc
ggcaaacggagcccggcgccacccttcactacctccactctgcaacaggaggcctcgcgc
aaacttggtttctcggtagcgcagaccatgagcgtagctcagaagctctacgaagccggt
aagatcagctacatgcggactgactcggtgaacctctcgcaggatgcgctggccgccgcc
aaagacgaaatcagccggtcttatggccctgagtacgcccagacccgtcagttcaaaacc
aaatcagcctcggcccaggaagcccacgaagccattcggccaactgacttttctttggta
aaagccggctctgactcgcaggagcaacgcctgtacgacctgatacgaaagcgggccatg
gcctcgcagatggccgatgcggtgattgagcgcacagtggcctccatcagcatcagcacc
cagcccggcactatgctaactgcgaccggggaagttatcacctttgaaggcttcttgaag
gcctactccgagtcgaaggacgaggaggtgcaggacgaaacccccacggagtcaacgttc
tcgcgggggctgccacccctgtcggtaggccaggcgctgccgctacagcagctacgggct
acggaacgctttgcttcgccggctgcccgctacactgaggcttcgctggtgaagaagatg
gaggaaatgggtatcggccggccctctacctatgcccccaccatcagcaccattcagaag
cggggctacgtggagaaagactcccgcgaaggcaaggaacgcaagttccgggtactcacg
ctggaaggtgagacagtgaacacggaggtgaaaacggaaacctacggagccgataaagcc
aagctgttcccgacggacaccgccatggtagtgaacgactttttggtggagcactttcca
gtgattgtggattaccagttcacggccaaggtagaagatgaattcgaccagattgccaat
ggccacgagcagtggactgatatgctggcgggcttctacggcactttccatgaaaccgtg
gaacgaggccaggatattgagcgcagcacactgggcagcacccgcgtcattggtacccat
cccgaaacaggccagaagctaacggctcgtttgggccggtttggcccttatgtacagatt
gaacccctggaaggttcagaggaaaaagccgtgtacgccagcttgcgcaagggacaattc
atcgagaacattaccctcgaagaagctcttgatttatttaagctgccacgtattgtaggc
cagtttgaggataaagacatgacggcagccctcgggcgcttcggcccttatatccgtcat
gatagcaagttctactcgctcacgaaggagcaggacccccacaccattacggcgcaggaa
gcaattgacctgattgaggcgaagcgcaaagctgatgctgaacgcctgatcaaggacttc
cccgagaacccggaagttcaggtgcttaatggtcgttttgggccatacattgtggcgggc
aagaagaatgtaaaaatccctaaaggtgaggagcccgcggcgcttacgctggaacgctgt
ttggagttggctgctgccaccccggataagcctgcaaaaggtggccgcttcggtgctaaa
aaagcacctgctacatcagctgaagatgccgctgataaacccgccaaaaaggccccagca
gctaaaaaaactgctgctaagaaaccagcggccaaaaaagctaccggtactgctaccaag
aaggcagccacaaaggctaagtaa
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