Hymenobacter taeanensis: HMJ29_15840
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Entry
HMJ29_15840 CDS
T08050
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hts
Hymenobacter taeanensis
Pathway
hts03420
Nucleotide excision repair
hts03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMJ29_15840
03430 Mismatch repair
HMJ29_15840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hts03400
]
HMJ29_15840
Enzymes [BR:
hts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMJ29_15840
DNA repair and recombination proteins [BR:
hts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMJ29_15840
MMR (mismatch excision repair)
Other MMR factors
HMJ29_15840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_11
DUF3553
PAH
DEAD
Motif
Other DBs
NCBI-ProteinID:
QJX48313
UniProt:
A0A6M6BLI2
LinkDB
All DBs
Position
complement(3786687..3788939)
Genome browser
AA seq
750 aa
AA seq
DB search
MGLDYLSLLNPSQAAAVMQIDGPCMIIAGAGSGKTRVLTYRIANLLEKGVDPYNILALTF
TNKAAKEMRARIEKVVGPNAKNLWMGTFHSIFARILRSEADKIGFPRSFTIYDTQDSKTL
ITQIVKELELDDKLYKPGLVLGRISAAKNKLISVQQYLNDPVIKQDDEAALRPKIGVLYQ
QYQQRCFKAGAMDFDDLLYQTNVLFKDHPDVLNKYQNIFKYVMVDEYQDTNYSQYLIARK
LAAKERNICVVGDDAQSIYAFRGADIQNILNFEKDYPELQVFKLEQNYRSTKNIVWAANS
VIKNNQAQLRKDVFSDNEDGPLIEVLKAASDNEEGKLVAQSIYEDKMNHHLSYDDFAILY
RTNAQSRAMEESLRKLNIKYKIVGGLSFYQRKEIKDLVAYLRLTVNPNDEQALRRVINYP
KRGIGDTTLAKLINAAEESNHTIWEVVSNADKFLPARTANPIVDFAEKIKAYTAVAAKED
AFEAAKFIAKNSGMIEELYADKSIEGLSRYENIQELLNGVKAYTEDPEREDKSLGAFLQD
IALVTDADTKDAQSEGEQVTLMTIHSAKGLEFRNVYIVGMEENLFPSQMMITSRADLEEE
RRLFYVAITRAEKKLTLSYATSRYQWGNLRSCEKSRFLDEIDPQYVDFKFSASPAGGAMD
SPFGHVLERRSNLVPPAPRKTVATKYVAPSDFQPSDTSNLQHGQRVEHPKFGFGQVTKLE
NQNGSVKAIIQFEEVGEKTLLLSFAKLRIV
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgggactcgattatctctctttattgaacccctcgcaggccgccgccgtgatgcaaatc
gatggcccctgcatgattatagccggtgccggctcgggcaaaacccgggtactcacttac
cgcattgctaacctgctggaaaaaggggttgatccgtacaatatactggctctcaccttt
accaataaggcggccaaggaaatgcgcgcccgtattgagaaggtagtgggtcccaacgcc
aaaaatctgtggatgggtaccttccacagcatctttgcccgcattctgcgctccgaagcc
gacaaaatcggttttcctcgctccttcaccatttatgatacccaggactctaaaaccctg
attacgcagattgtgaaggaactggagctcgatgataagctctacaagcccggtttggtg
ctggggcgaatttcagcggcaaagaacaagctgatttcggtgcagcaataccttaacgac
ccggtaattaagcaggacgacgaggcagcgctccggcccaagattggtgtgctgtatcag
cagtatcagcagcgttgcttcaaggccggcgccatggacttcgacgacctgctttaccag
actaacgtcctgttcaaagaccaccccgatgtgctgaacaagtaccagaacatcttcaag
tatgtgatggtagatgagtatcaggataccaactactcgcagtatcttattgcgcggaag
ctggcggctaaggagcggaacatctgcgtggtaggcgatgatgcgcaaagcatttacgcc
ttccggggcgccgatattcagaacattctcaacttcgagaaagactaccctgagctgcag
gtgtttaagctagagcagaactaccgctccaccaagaacattgtgtgggcggctaactcg
gttatcaaaaacaaccaggctcagctgcgcaaagacgtgttctccgacaacgaagacggc
ccgctgattgaagtattaaaggcggcttctgataacgaggagggcaagctggtggcccaa
agcatctacgaggacaagatgaaccaccatctatcctacgatgactttgccattctgtac
cgcaccaacgcccagagccgggccatggaagaatcgttgcgcaagctcaatatcaagtat
aagattgttggcggcctgagcttctaccagcgcaaggaaattaaggacttagtggcctac
ctgcgcctcacggtgaaccccaacgacgagcaggccctgcgccgcgtcatcaactacccc
aagcgcggcatcggcgacaccacgctggccaagcttattaatgcggccgaggagtcgaac
cataccatttgggaggtggtcagcaacgccgacaagtttctaccggctcgcacggccaac
ccaattgttgatttcgcggaaaagattaaggcttacactgccgtagcagctaaagaagac
gcctttgaagccgcgaaatttattgccaagaactcgggcatgattgaggagctctatgct
gataaaagcatcgagggcctttcccgctacgagaacattcaggaactcctgaacggcgtg
aaggcctacaccgaggaccccgagcgcgaagacaaatcattgggcgctttcctgcaggac
attgccttggttacggacgccgacacgaaagacgcccagagcgaaggtgagcaggtgacg
ctcatgacgattcactcggctaaaggtctggagttccgcaacgtgtacatcgtgggtatg
gaggaaaacctcttcccttcccagatgatgattacctcccgcgccgacctggaagaagaa
cgccgcttgttttacgtggccatcacgcgggccgagaagaagctgacgctaagctacgct
acttcgcgctatcagtggggcaacctgcgcagttgcgagaagagccgcttcctggatgaa
atcgaccctcaatacgttgatttcaagttttctgccagccccgctggcggtgccatggat
tcgcctttcggccacgtgctggagcgccgcagcaacctggtgccccccgccccccgcaaa
accgtagccaccaaatatgttgctccctccgacttccagccttctgatacctctaacctg
cagcacgggcagcgcgtggagcacccaaagttcgggttcggccaagtaactaagctggaa
aaccagaatggctccgttaaggccatcatccagtttgaggaagtgggcgagaaaaccttg
ctgttgagcttcgctaagctgcggattgtatag
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integrated database retrieval system
