Hymenobacter taeanensis: HMJ29_19075
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Entry
HMJ29_19075 CDS
T08050
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hts
Hymenobacter taeanensis
Pathway
hts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMJ29_19075 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hts03019
]
HMJ29_19075 (recQ)
03400 DNA repair and recombination proteins [BR:
hts03400
]
HMJ29_19075 (recQ)
Enzymes [BR:
hts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMJ29_19075 (recQ)
Messenger RNA biogenesis [BR:
hts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMJ29_19075 (recQ)
DNA repair and recombination proteins [BR:
hts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMJ29_19075 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
TniB
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QJX48898
UniProt:
A0A6M6BM45
LinkDB
All DBs
Position
complement(4551335..4553620)
Genome browser
AA seq
761 aa
AA seq
DB search
MLFAAEPLAPTIESARRVLKKYYGYDSFRPMQEDIIQNILSGQDTVVLMPTGGGKSVCFQ
VPAVVQEGVCVVVSPLIALMKDQVEALKANGISAAYINSSVGQSEQNNIAADCLNGYLKL
LYVSPEKLLSEGFLNLLRRMRISMFAIDEAHCISSWGHDFRPEYTQLRVLREQFPQIPII
ALTATADRLTQRDIQQQLRLTEPRVFLSSFDRPNLNLIVRPGQDRVGGILEFLERHQGES
GIIYCLSRKQCETLAQKIQAKGIKAGFYHAGMTPNQRAAVQEGFLKDDLQVIVATIAFGM
GIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGSPATAVLFYSFGDVMSLRDMLTKENPN
LTQLNLTKLERMQQFAEAASCRRKILLNYFGETLAQDCGNCDICRNPPTTFDGTELAQKA
LSAVVRSRERVSISLLIDVLRGMRNQAVLSGGLDQIKTYGAGRDLPYLDWYSYVHQMLND
GLVYIAYEEGYALKITDIGREVLQGQRTVPMKKFQPAEKAEKAPRGRKAAAAAAKAPPVT
REAQLFEALRTLRKRIADEQGVPPYVIFTDSTLQEMAVERPVNRVAMLGISGVGMKKFET
YGEAFIREVLAHGGNPAAQAELDEDGLPDHLDPDDFSSARTVRKKPVKEAKEPKATTSEV
NGTAETTHQLHRMGLSVEAIAQRRDLAISTVQTHLTTCYAKGLELRIEEFLKPEDLAEIQ
TAQAQLGSSPMLRDLFDHLREKYDYFKLRLALMYFKKLRGE
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgttatttgctgccgaacctcttgctcctaccatcgaatctgcccgccgggtactgaaa
aagtactacgggtatgactcgttccgtcccatgcaagaggatatcattcagaacattctg
agtgggcaggataccgtggtgctcatgcccaccggcggcggtaagtcggtttgctttcag
gtgccggctgtagtgcaggaaggcgtgtgcgtggttgtgtcgccgctgattgccctgatg
aaagatcaggtagaggccctgaaagccaacggcatttctgcggcctacatcaacagcagc
gtaggccagagcgagcagaacaatattgccgccgactgcctcaacggctaccttaaactg
ctttatgtctcgcccgaaaagctgctctccgaaggcttcctgaatctgctgcggcggatg
cgcatcagtatgtttgccattgatgaggcgcactgcatcagctcctgggggcatgatttc
cggcccgagtacacccagctgcgggtgctgcgcgagcagtttccgcaaattcccattatt
gcccttaccgccaccgccgaccgcctcacccagcgtgatattcagcagcagctgcgcctg
acggagccccgggtattcctatcgtcgtttgacaggcccaacctgaacctgattgtgcgg
ccgggccaggaccgggtagggggtattctggagtttctggagcgtcaccagggcgagtcg
ggtattatttattgcctctcgcgtaagcagtgcgaaacgctggctcagaaaattcaggct
aaaggcattaaggccggattttaccatgccggcatgacgcctaaccagcgcgccgccgtg
caggagggcttcctgaaagacgacctgcaggtgattgtggccaccattgcttttggcatg
ggcatcgataagagcaacgtgcgatgggtgattcactacaacctgcccaagaacatcgag
ggctactaccaggaaattggccgtgccggccgcgatggtagccccgctacggccgtgttg
ttctattccttcggggacgtgatgagcctgcgcgacatgctcacgaaggaaaatcccaac
cttacccagctcaacctcaccaagctggagcgcatgcagcagtttgcggaagctgccagt
tgccgccgcaaaattctgctcaactacttcggcgagacgctggcccaggactgcggcaac
tgcgacatctgccgtaatccgcctactacgttcgatggtacggagctggcccaaaaagcc
ctctcggcggtggtacggagccgcgagcgggtaagtatcagcctactcattgacgtgctg
cgcggcatgcgtaaccaggctgtgcttagtggtggcctagaccagatcaaaacctatggt
gccggccgcgacctgccttacctcgactggtacagctacgttcatcaaatgctgaatgat
ggcttggtgtacattgcctacgaggaaggctacgcgctgaaaatcacggatattggtagg
gaggtactgcaggggcagcgcaccgtgcccatgaagaagtttcagccagcggagaaggcg
gagaaggcacctcgtggccggaaagcagcagcagcggcggcaaaagcacctcccgtcacc
cgcgaagcccagctttttgaggccctgcgtactctccgcaagcgcatcgccgatgagcaa
ggcgtgcccccgtacgtaatcttcaccgattctactctgcaggaaatggcggtggagcgg
ccagttaaccgggtagctatgctgggtatttccggggttggtatgaagaagtttgaaact
tacggcgaagctttcattcgggaggtactggcccacggcggcaaccccgctgcccaggcc
gagctggatgaggacggcctgccggatcatctcgaccccgacgattttagctccgctcgt
acggtacgcaaaaagcccgtgaaggaagcaaaagagcctaaggccaccacgtcggaggtg
aatggcaccgcggaaactacgcaccagctgcaccgcatgggcttgagcgtagaggccatt
gcccagcgccgcgacctggccatttccaccgtgcaaacccacctgacgacgtgctacgct
aaagggctggagctgcggattgaagaattcctcaagccggaagatctagccgaaatccag
acggcccaggcccagctcggtagcagccccatgctccgcgacctatttgaccacctgcgt
gagaagtacgattacttcaagctccgtctggctcttatgtattttaagaagctacgcggg
gagtag
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