Vreelandella titanicae: HZS52_01640
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Entry
HZS52_01640 CDS
T06950
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
htt
Vreelandella titanicae
Pathway
htt03410
Base excision repair
htt03430
Mismatch repair
htt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HZS52_01640
03430 Mismatch repair
HZS52_01640
03440 Homologous recombination
HZS52_01640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htt03400
]
HZS52_01640
DNA repair and recombination proteins [BR:
htt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HZS52_01640
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HZS52_01640
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HZS52_01640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QNU63107
LinkDB
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Position
complement(357778..359589)
Genome browser
AA seq
603 aa
AA seq
DB search
MASVTDLPHRTLSSSKAGPRLEPRPVDEALYARAQAEGLSELQARLLASRLPGYSGELLP
LIAPSLRYLAHPEKLADGRRAAERIAQAVAEGEAIGILTDYDVDGITSHVVIKRTLVELF
GVPEGKLHSLIGHRIHDGYGISLPLVERTLAQKPFPTLVITADCGSSDEPRIARLKAAGI
DVVVSDHHALPSEGPPSSAFACVNPTRDDCEYPDKTIAGCMVAWLLMSLARGVLIEWGAL
SESTPKLSPWLSYVALGTVADCVSLGGSPANRAVVNQGLKLINRMDAACWRAMATRLGAD
SVPFNAETLAFQMGPRINARSRLDDPYAALHFMLAENDGVANRQLDVLDQDNQSRKAIEA
DMAAEARTLATAALDADEPAVVVLLEDGHPGVQGIVASRLVQAYGRPALVLTQASAPGML
TGSGRSIDGLHLRDALQRTFELAPQALPRFGGHSGAAGVGVPRDQLDAFKAAFLRAVGEQ
LEGRTLYPRLWTDGELSTAQLSLTTLQEIETLGPYGREFDPPLFEGRFIVEALRPVGADG
AHLMLELSTGPVTCKAIWFRALTPGELPGFNVGDTLHCAYKLNRNRWRGRETLQLMVEHA
SPI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagtgactgatttaccccatcgcacgctgtcgtctagcaaggccgggccgcgc
ctagagcctcgtccagtggatgaggcgctttatgcccgcgctcaggcggaaggcctaagc
gaactgcaggcgcgtttgctggcctcgcgcttgccgggctacagcggtgagttgctaccg
ttaatcgcacctagcctgcgttatttggcccacccggagaaactggctgacggtcgccgc
gccgccgaacgtatcgctcaggcggtggcagagggtgaggccatcggcattctcaccgac
tacgacgtggatggcattacctcccacgtggtgattaagcgcacgctggtggagctgttt
ggggtgccagagggcaagctacatagcctgattggccaccgtattcatgacggctatggg
attagcctaccgctggtagagcgcaccttggctcaaaagccgtttccgaccctggtgatt
accgccgattgtggcagctctgatgagccgcgtatcgcgcgattaaaagcggcaggtatc
gacgtggtagtcagcgaccaccacgccctgcccagtgaggggccgccaagctcggcattc
gcctgtgttaaccctacccgtgatgactgtgagtatcccgacaaaaccatcgctggctgt
atggtggcgtggctgttgatgtcactcgcccgcggcgtgctgattgagtggggggcgctt
tcagagtcgacgcccaagctgtcgccctggctttcctacgtagctttgggcaccgtggct
gactgtgtctccctggggggcagtcccgccaaccgcgcggtggtcaatcaagggttaaaa
ctgatcaatcgcatggatgcagcgtgctggcgcgccatggccacgcgcttaggcgctgac
agtgtgccgtttaacgccgagacgttagcgtttcagatggggccgcggattaatgcccgc
tcgcggctggacgacccctacgcggcgctgcactttatgctggccgagaacgatggggtc
gccaatcgccagctcgacgtgctggatcaggataaccagtcccgcaaagcgattgaggct
gatatggccgccgaggcgcgcactcttgccacagcagctctggacgccgatgagcccgcc
gtggtggtgctgcttgaagacgggcaccccggcgtacagggtatcgtcgcctcgcgattg
gtgcaggcctacgggcgcccggcgctggtgctaacacaagcctcggcaccgggtatgcta
accggctccggccgctcgattgatgggctgcacctgcgtgatgccctacagcgcaccttt
gagcttgctccccaggcgttaccgcgctttggcggccatagtggtgcggcaggcgtaggc
gtgccacgggatcagcttgacgcctttaaagcggctttcctgagggccgtaggcgaacag
ctggagggacgaacgctctatccgcgcctatggacggatggcgagctctccacggcacag
ctttcgctgaccaccttgcaagagatagaaacccttgggccctacgggcgggagtttgat
ccgccgctgtttgaaggccgctttattgtcgaggcgctgcgcccggtgggtgctgacggc
gcgcacctgatgctggaactctccactggcccggtgacctgcaaagccatctggtttcgt
gccttaacgccaggggaactgcctgggtttaacgtgggggatacactgcactgtgcttat
aagcttaaccgtaaccgctggcgcggccgcgagacgctgcagttgatggtcgagcacgcc
agcccaatttaa
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