Vreelandella titanicae: HZS52_02475
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Entry
HZS52_02475 CDS
T06950
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
htt
Vreelandella titanicae
Pathway
htt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZS52_02475 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htt03019
]
HZS52_02475 (pnp)
03016 Transfer RNA biogenesis [BR:
htt03016
]
HZS52_02475 (pnp)
Enzymes [BR:
htt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HZS52_02475 (pnp)
Messenger RNA biogenesis [BR:
htt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HZS52_02475 (pnp)
Transfer RNA biogenesis [BR:
htt03016
]
Prokaryotic type
tRNA degradation factors
HZS52_02475 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
KH_Mug60-KHD4
Motif
Other DBs
NCBI-ProteinID:
QNU63258
LinkDB
All DBs
Position
complement(522600..524768)
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AA seq
722 aa
AA seq
DB search
MLKEVAVNPVKKTFQYGRSTVTLETGRIARQATGAVMVTMDDTVVLCTVVARKEANPSQP
FFPLSVHYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVVC
TVLSTDRNHDPDIAALLGTSAALSISGVPFSGPIGAARVGFNEEKGYFLNPTVEELATSE
LDMVVAGTEKAVLMVESEAKELLEDEMLGAVLFGHQEMQVAISAINELVAEAGKPRWEWQ
AAEENQALKAAMADAFEAKVGDAYRITDKMQRQDALAELKDQAIEQLAADEGEPVNDKFS
KDDVKGAFASLEKRVVRSRVVKGEPRIDGRDNQTVRPLAIEVGVLPKAHGSAIFTRGETQ
AIAVATLGTLRDSQLIESLEGERKDRFMLHYNFPPYSVGEAGFMGGPKRREIGHGRLARR
GVQAMLPSEDVFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLV
KDPDGFAVLTDILGDEDHLGDMDFKVAGSEEGVTALQMDIKIEGINEEIMELALQQALTA
RLSILEQMNVVISQSRSDVSDNAPSMATIKIDPDKIRDVIGKGGATIRKICEDTGASIDL
DDDGTVRIYAEDKAAAKRAIDTVLAITAEAEIGKLYHGKVVRIADFGAFVNIMPGTDGLV
HISQIVAERVNNVRDFLNEGDDVVVKVLDIDNRNRVKLSMKEISEEEKAAFTAEAAETEA
AI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggaagtcgctgtgaatccggtaaagaaaacgttccagtacggtcgtagcacc
gtcacgctcgaaaccgggcgtattgctcgccaagctaccggcgctgtcatggttaccatg
gatgacaccgtcgtgctgtgtaccgttgtcgctcgcaaagaggcaaacccgagccaaccc
tttttccctctctcggtacactaccaagagaaaacctacgcagtgggcaagattcctggc
ggcttcttcaagcgcgaaggtcgtcccactgaaaaagagacgctgacctcgcgtctgatt
gatcgcccaatccgtccgctgttccctaaaggctttatgaacgaagtgcaggtcgtctgt
accgttctctccaccgaccgtaaccacgatccggatatcgccgcactgcttggcacctcc
gcggcgctgagtatctctggcgtgccgtttagtggcccgattggcgcagcccgggttggt
tttaacgaagagaaaggctacttcctcaacccaacggttgaagaactggccacctctgag
ctcgacatggtcgtcgccggtactgaaaaagccgtgctgatggttgagtcggaagccaaa
gagctgctcgaagacgaaatgctgggagccgttctgttcggtcaccaggaaatgcaggtc
gcgatcagtgccattaacgaactggttgctgaagcgggcaagccgcgctgggagtggcag
gccgccgaagagaaccaggcgctcaaagccgccatggccgatgcatttgaagcgaaagtg
ggcgatgcttaccgcatcaccgacaaaatgcagcgccaggatgcactggctgagttgaaa
gatcaggcgattgaacaactggcagccgatgaaggcgaaccggttaacgacaagttcagt
aaagatgacgtcaaaggtgcctttgctagcctggaaaaacgcgttgtgcgttcacgggtg
gtaaaaggtgagccgcgtattgacggtcgtgacaatcaaaccgttcgtccgctggctatc
gaagtcggtgtgctgccgaaagctcatggttctgccatctttacgcgtggtgagacccag
gcgattgccgtagcaacactgggcacgctgcgtgattcacagctaatcgaatcactggaa
ggtgagcgtaaagaccgctttatgctgcactacaacttccctccctactcggtgggtgaa
gctggctttatgggtggcccgaagcgtcgcgaaatcggccatggccgcttagcgcgtcgt
ggcgtgcaggcaatgctgccgtcagaagatgtcttcccctacaccattcgtgtggtgtct
gaaattaccgagtctaacggctccagctccatggcctctgtatgtggctcttcgctggcc
ctgatggacgcaggcgtgccgttaaaagcaccggtcgccggtattgccatgggcttggta
aaagacccggacggttttgcggtattgactgatatcctgggtgacgaagatcacctcggc
gatatggactttaaagttgccggttccgaagagggcgtcaccgccctgcagatggacatc
aagatcgaaggcatcaacgaagagattatggagctcgcgctgcagcaagcactgaccgcg
cgactgagtattctcgagcaaatgaatgtcgtgatcagccagagccgtagcgatgtctcc
gacaacgcgccgtccatggcaacgatcaaaatcgatccggacaagatccgtgacgttatc
ggtaaaggtggcgcaaccattcgcaaaatctgcgaagacaccggcgcctctattgatctc
gacgacgatggcaccgtgcgtatttacgcggaagataaagccgccgccaagcgcgccatc
gacaccgtactggcgattaccgctgaagcggaaatcggcaagctatatcacggcaaggtc
gtgcgtattgctgacttcggtgcgttcgttaacatcatgcccggcaccgatggcctggtt
cacatctcgcaaatcgttgccgagcgggttaacaacgtgcgcgacttcttgaacgaaggc
gatgacgtggtcgttaaggtgctggatatcgacaaccgcaaccgcgtgaagctgtcgatg
aaagagatcagcgaagaagagaaagccgcttttaccgcggaagcagcggaaaccgaagcg
gcgatttaa
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