Vreelandella titanicae: HZS52_05035
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Entry
HZS52_05035 CDS
T06950
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
htt
Vreelandella titanicae
Pathway
htt03420
Nucleotide excision repair
htt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
htt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HZS52_05035 (uvrD)
03430 Mismatch repair
HZS52_05035 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htt03400
]
HZS52_05035 (uvrD)
Enzymes [BR:
htt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZS52_05035 (uvrD)
DNA repair and recombination proteins [BR:
htt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HZS52_05035 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HZS52_05035 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QNU63720
LinkDB
All DBs
Position
complement(1063371..1065569)
Genome browser
AA seq
732 aa
AA seq
DB search
MDDVTAILDQLNSAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYALLA
VTFTNKAAKEMRTRLEALLSISMRHVWVGTFHSIAHRLLRTHWQDAKLPQHFQIIDSDDQ
LRLVKRLLKDYSIDDERFPPRQVQHFISGCKEEGLRPHQVNVDGDAYMGQMVELYERYQL
TCERGGLVDFGELLLRSLELLRDNPALLNHYQERFGHVLVDEFQDTNTLQYAWLKLLTGM
KTPMTAVGDDDQSIYGWRGAKVENISRFEQEFPQTHTVRLEQNYRSTSAILEAANTLISH
NSERMGKNLWTDGIEGEPISIYAGFNDLEEARYIVDTIKEKVDEGFNRRDIAILYRSNAQ
SRLLEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLMLNRDDDASLERVINVPTRGIG
TRTVEIVRLRAREQSIPLWQALHDAINDGTLKGRAANAVQTFANLIEQLDNDASGMALHE
IIDHVTIHTGLIEHHKSERGEKGQARVENLEELVTAARAFTQGDVFEAPEAGEGMAALEA
FLSEAALNAGDHEAEEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSLEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHISRP
VTASRTSFAQQSVESSGDIPALHVGQGVEHPVFGEGIILNAEGEGARARVQVSFEGEGVK
WLVLGFAKLTPL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgattctcgatcagctcaactccgcccagcgcgaagcagtgagc
gccccccaaggtaatctgttggtgctcgcaggcgcaggctccggtaaaacccgcgtgctg
gtgcatcgcatcgcctggctgatgcaggccgaagggctgtccccttatgctctgctggca
gtgacctttaccaataaagccgccaaagagatgcgcacccgccttgaggcactgctgagc
atctcgatgcgccatgtgtgggtaggcacctttcactccatcgcccaccgcctgctgcgc
acccattggcaggacgccaagctgccgcaacacttccagattatcgattctgacgatcag
ctacgcctggtcaaacggttgctgaaagattactcgatcgacgatgaacgcttcccaccc
cgccaagtgcagcactttatctccggctgcaaagaggaggggctgcgcccgcaccaggtc
aatgtggatggcgatgcctacatgggccagatggttgagctctacgagcgctaccagctc
acctgcgagcgcggcggcctggtcgatttcggtgaactgctgctgcgaagcctggagcta
ctacgcgacaacccggcgctgttaaaccactaccaggagcgctttggtcatgtactggta
gatgagttccaagataccaataccctgcaatacgcttggctaaaactgctcaccggcatg
aagacgccgatgacggcggtgggtgatgacgaccagtcgatctacggctggcgcggtgcc
aaggtggagaatatcagccgctttgagcaagagtttccgcaaacccacaccgtacggctt
gaacagaactatcgctccaccagcgccatcctggaagccgccaatacgctgatcagccac
aacagcgagcggatgggtaaaaacctgtggactgacggcatcgaaggcgagccgatctca
atttacgctgggtttaacgacctggaagaagcccgctatatcgtcgataccatcaaggag
aaggtcgacgaaggctttaaccgccgcgatatcgcgattctctaccgctcaaacgctcag
tcgcggctgctggaagagacgctgattcgccaaggcatgccctaccgtatttacggcggc
caccgcttctacgagcgcctggaaatcaagaatgccctggcctaccttcgcctgatgctc
aaccgcgacgacgatgcctcgctggagcgggtgattaacgtacccactcgcggcatcggc
acgcgcacggtcgagattgtccgcctgcgcgctcgggaacaaagtatccctctctggcaa
gcgctccacgatgcgattaacgacggcaccttgaaaggccgcgcggccaatgccgtgcaa
accttcgccaacctgatcgagcagctcgataacgatgcctctggcatggcgctgcacgaa
attatcgatcacgtcacgatacacacgggtctgatagagcatcacaaaagtgagcgcggc
gagaaaggccaagcgcgggtcgagaacctggaagagttggttaccgctgcccgtgccttt
acccaaggcgatgtctttgaagcgcctgaagcgggcgaaggcatggcggcactggaagca
tttctctcagaggccgctcttaacgcaggcgaccacgaagccgaagagtttgaggacagc
gtacagctgatgacgctgcactccgccaaaggcctggagttcccggtagtatttattgcc
ggtgtcgaggaggggctgtttccacacaagatgtccctggaagagccgggtaggctcgaa
gaggagcgccggctctgttacgtcggcgtcacacgcgcgatgcagaagctctacctcaca
cacgccgaaacccgccgcctgcacggcaaagaagtgtttccacgcccgtcgcgttttttg
cgcgaactaccgccgcacctactcgaagaagtccgtctgcgcgggcatatttcccgccca
gtcaccgcgtcgcgcacctcctttgctcagcaaagtgtcgagagcagcggtgatataccc
gccttacatgtcggccaaggcgttgagcacccggtgttcggcgaagggattattcttaac
gcggaaggcgaaggtgcccgcgcccgggtacaggtcagctttgaaggcgaaggggtcaaa
tggctagtgcttggttttgctaagctaacgccgctttaa
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