Vreelandella titanicae: HZS52_12840
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Entry
HZS52_12840 CDS
T06950
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
htt
Vreelandella titanicae
Pathway
htt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HZS52_12840 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htt03400
]
HZS52_12840 (recD)
Enzymes [BR:
htt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HZS52_12840 (recD)
DNA repair and recombination proteins [BR:
htt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZS52_12840 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
NAT10_TcmA_helicase
SH3_13
UvrD-helicase
SLFN-g3_helicase
nSTAND3
AAA_28
AAA_16
NACHT
UvrD_C
AAA_5
NTPase_1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QNU65155
LinkDB
All DBs
Position
complement(2783406..2785697)
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AA seq
763 aa
AA seq
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MNLDLFADDAPPAAVDPTASAAPPTESAARATQPHPALSDTAALFLLCERWVSRGWLRDL
DQALVRFLDRETQNAPPLLLLGAALASHQLGRGHVCLDLATTLEAPDFALSLPPEGDDLN
DPPPLPSQVLATLTLPEWQAALNHPTLISDGPGNTPLVVSHSVNTSKLYLRRYWQFEQTL
HQEIAARLSVDSSVHSSRNSSEESPLLKSALDALFPATGTLNWQKNACALAARSPFAIIT
GGPGTGKTTTVMRLLALLQTLQLAQPHAHPLRIRLAAPTGKAAARLNESIAGQVKDLPLS
GLESLLDGHSAADSSNAIDIPTEVTTIHRLLGARADTRHFRHNAANPLALDVLVVDEASM
VDIEMMTALLSALPASAKLVLLGDKDQLASVEAGAVLGDLCRRADAAHYTPATAQWLAEL
TGHPLPETLIDPNGQPLDQAITMLRVSHRFNAQSGIGQLAQAINQPLSESQSEREKHQAV
HGVLNNGYADLHHLVLKPDAQNEDSALERLVITGSPERFPNAGEGRTNFKGEPIAPPTGY
QHYLSTLASERPGTALAFEENGDAYDGWAKQVLKAYSRFQLLCALRKGPWGVEGLNLRIA
KTLRREKLLFGNDHSLEKGWFEGRPVLVTQNDYGLKLMNGDIGITLAVPDPRTPGRSLLR
VAFPTSDVDNPIHWVLPSRLHAVETVFAMTVHKSQGSEFQHTALLLPQTPNPILTRELVY
TGITRARDWLTVIEAKRGILNDAVTREVMRVSGVDITRGCINE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgacctgttcgccgatgacgcaccgcccgcagcggttgatccaacggcatcg
gcagcaccaccgacagaatcagccgccagagctacccaaccgcaccccgcgctaagcgat
accgccgcgctattcctactgtgtgaacgctgggtttcccgtggctggctgcgggacctg
gatcaggccctggtgcgctttctcgaccgtgaaacccaaaacgccccgccgctgctactg
ctcggcgcagcgctagccagccaccagctcggccgtggccatgtttgcctggatttagcc
accaccttggaagcgccggattttgcgctttcgctgccgccggaaggcgacgacctgaac
gacccgccgccgctgcccagccaagtgctagccacgctaacgctgcccgaatggcaggcc
gcgctcaaccaccccacgctgatcagcgacggccccggcaatacgccgcttgtagtaagc
cacagcgtcaacaccagcaaactctacctgcgacgctactggcagttcgagcaaacgcta
caccaggaaatcgccgctcgacttagcgtggatagctctgtacatagctctaggaatagc
tcagaggaatcaccgctactcaaaagcgcgctggatgcgttattccccgctaccggcacc
ctgaattggcaaaagaacgcctgcgccctggcagcccgcagccccttcgcgatcatcacc
ggcggccccggcaccggcaaaaccaccaccgtgatgcgcctgctggccttgctacaaacc
ctgcaactggcccagccccacgcccacccgttgcgcattcgcctagccgcccccaccggc
aaagccgccgcacggctgaatgaatccatcgccgggcaggtgaaagacctccccctaagc
gggttggaatctctattagatgggcactcagccgctgactcctcgaacgcaatcgacatt
ccgacggaagtgactacgatccacaggctacttggcgcccgcgccgacacccgccatttc
cgccacaacgccgccaacccgctggcgctggatgtgctggtggtggatgaagcctcgatg
gtggatatcgaaatgatgacggcgctgctcagcgccctacccgccagcgccaagctggtg
ctgctgggggataaagaccagttggcatccgtagaagcaggtgccgtgctgggcgacctg
tgccgtcgcgccgacgccgcccactacacacccgccacggcgcagtggctagccgaactc
accggccacccgctgccggaaacattaatcgaccccaacggccagccgctggatcaagcc
attaccatgctgcgggtaagccaccgctttaatgcccaaagcggcatcggccaactcgct
caagccattaaccaaccgctaagcgaatcacagagtgaacgggagaagcaccaagccgtg
catggcgtgctgaataacggctatgccgacctgcaccacttagtgttaaagccagatgca
caaaacgaagacagcgccctggagcgcctagtaatcaccggcagcccggaacgtttcccc
aacgcaggcgaaggccgcaccaatttcaagggcgagccgattgcaccgcccaccggctac
cagcactacctgagcaccctagcgagtgaacggcccggtacggcgctagcgtttgaagag
aacggcgacgcttacgatggctgggcgaagcaagtactaaaggcttacagccgctttcag
ctgctgtgcgcgctacgcaaaggcccctggggggtagaaggcttaaacctccgaatcgcc
aaaaccctgcgccgcgaaaagctgttgtttggcaacgaccactcgttagaaaaaggctgg
tttgaaggccgcccggtactggtcacccaaaacgactacggcctgaaactaatgaacggc
gatatcggcattaccctcgccgtgcctgatccccgcactcctggtaggtcgcttttacgt
gtagccttcccaaccagtgacgtagacaacccgattcactgggtgctgccatcccgcctc
catgcggtagaaaccgtgttcgcaatgacggtacacaaatcccaaggctctgagtttcag
cacaccgccttgctgctaccacaaacacccaacccaatcctcacccgcgagctggtctac
accggcatcacccgtgcccgcgattggctaacagtgatcgaagccaaacgcgggatattg
aatgatgcggtgacgagggaggttatgagagttagtggggtggacatcacaaggggttgc
ataaatgaatag
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