Vreelandella titanicae: HZS52_13930
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Entry
HZS52_13930 CDS
T06950
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
htt
Vreelandella titanicae
Brite
KEGG Orthology (KO) [BR:
htt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
htt03016
]
HZS52_13930 (rnd)
Enzymes [BR:
htt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HZS52_13930 (rnd)
Transfer RNA biogenesis [BR:
htt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HZS52_13930 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QNU60890
LinkDB
All DBs
Position
3035199..3036332
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AA seq
377 aa
AA seq
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MLLSSLTPSYQWLDTPEALDAACEQVADASVIALDTEFFRENTFFPVPALVQFTAGEEAY
LIDPVAVPCTDKFRALLQNSAIKLLHACSEDLEVFQHWAGVLPEPLIDTQVVQGFLGENP
GMGYQKLVEFWVGETLPKEETRSNWLLRPLSPAQCQYAALDVIYLLKAWTLQAEKLAMLG
RREWVDAECASLIEQAGRSVDNDQQWYTRQRQLWRLTPRQMEAYRLMTTWREGETRRRDL
PRNWLISDKLLFAIAEKMPSNRFELAEVEGVKPMLIKKEGDALLAMVKQAQHCDEEALPK
RWPDPMHPTFKSRFKALKKAVTAKANDLGVAPEMLMRRRDIETLVMQDLAGEPLTWPTGW
RGECLNGALAQALEERA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgtcctctctgaccccctcttatcaatggcttgatactccagaggcgctcgat
gcagcgtgtgagcaagtagccgatgcttctgtaattgctctggataccgagtttttccga
gagaacacgttctttccagtgccggcgttggttcaattcaccgcgggggaagaggcttat
ctgattgatccggtagccgtcccgtgtactgataaattccgagccctgctgcaaaatagt
gctatcaagttactgcacgcctgcagcgaagatctagaagtcttccagcactgggcaggt
gtattgccggaaccgttaatcgatactcaggtagtacaaggatttttaggcgaaaatcct
ggaatggggtatcaaaagctggtcgaattttgggtcggcgaaaccctgcctaaggaagag
acccgctcaaactggctattacgcccgctgtcgcctgcgcagtgccagtacgctgctctg
gatgtgatctatttgttaaaagcctggacgcttcaggctgaaaaactcgccatgctggga
cggcgtgaatgggtagacgctgagtgtgctagcttaattgaacaggcgggccgcagcgtc
gataacgaccagcagtggtatacccgtcaacgccaattgtggcgcttaacgccccggcaa
atggaagcgtatcggctaatgaccacttggcgtgaaggcgagacacgccgtcgtgacttg
ccgcgcaactggttgattagcgataagctgctatttgcgatcgccgaaaagatgcccagt
aatcgcttcgagctcgctgaggtggaaggcgttaaaccgatgctgatcaaaaaagagggc
gacgcactgctggcaatggtcaaacaggcccagcactgtgatgaagaggcgctgcccaag
cgttggccagaccccatgcacccgacgttcaaatcacgctttaaagcactcaagaaggcg
gtaaccgctaaagctaatgacttgggtgtggcaccggaaatgctcatgcgccgccgtgat
attgaaacactggtgatgcaggacttggcaggggaacctctcacctggccgaccggttgg
cgtggcgaatgtctgaatggcgcgttggcccaggcccttgaggagcgagcataa
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