Vreelandella titanicae: HZS52_14895
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Entry
HZS52_14895 CDS
T06950
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
htt
Vreelandella titanicae
Pathway
htt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZS52_14895 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htt03021
]
HZS52_14895 (rho)
03019 Messenger RNA biogenesis [BR:
htt03019
]
HZS52_14895 (rho)
Transcription machinery [BR:
htt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HZS52_14895 (rho)
Messenger RNA biogenesis [BR:
htt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HZS52_14895 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
AAA_25
ABC_tran
AAA_19
AAA_22
AAA_16
NACHT
AAA
AAA_30
nSTAND_NTPase5
ResIII
ATPase_2
NPHP3_N
cobW
AAA_24
nSTAND3
NB-ARC
Rad17
Viral_helicase1
Spore_III_AA
AAA_17
NTPase_1
AAA_18
Mor
AAA_11
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QNU61070
LinkDB
All DBs
Position
3251044..3252000
Genome browser
AA seq
318 aa
AA seq
DB search
MTRKTLGLKTKRQLDAQPADKAEDQFPDDPEKRFLNGVAIHPSPRIYLEPGSQERTVRAM
DLITPIGMGQRGLIVAPPGSGKTTMLKHICQAVAEAHPDIKLYALLIDERPEEVTDFKRS
VSAEVHASSSDESYTHHVRMADQLLATARKQAGEGHNVMIVIDSLTRLSRVHNAEQRGNG
RTMSGGLDSRAMEIPRKLFGAARKIENGGSLTILATVLVDTGSRMDQVIFEEFKGTGNME
LVLSREVANQRIFPAIDIAKSSTRREELLIDAKDIEKVRTLRRALTTLKPVEGAQKLLNL
LDKYPTNAELLDAFLPAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaccagaaaaacactaggcttgaaaacaaaaaggcagttagacgcccagccagctgac
aaagctgaagatcaattcccggatgatcccgaaaaacgctttttaaatggcgtcgctatt
catccttccccacgcatttatttagagcctggctctcaagagcgtactgtgcgagcgatg
gatttgattacgcccattggtatggggcagcgggggttgattgttgcgccgccaggctct
ggcaaaacgacgatgttaaaacatatctgtcaggccgtagcagaagctcatcctgacata
aagctgtatgccttgctgattgatgagcgcccggaagaagtgaccgattttaagcgcagt
gtgtcggcagaagtacatgcatcgtcttcagacgaaagctacacacaccatgtgcgtatg
gcagatcagctccttgcgacggcgcgtaagcaagcaggcgaggggcataatgtgatgatt
gtgatcgactctcttaccagactctcgcgggttcataatgccgagcagcggggcaatggt
cgcactatgtcgggtgggctggattcccgagcgatggaaataccacgaaaactgtttggc
gctgcgagaaagatcgaaaacggcggttcgctcaccattctggccacggtgctggtggat
acgggaagccgtatggatcaggtgattttcgaggagttcaagggcaccggcaatatggag
ctcgtgttatcacgcgaagtggccaatcaacggattttcccggcgatcgatattgccaaa
agcagtacccgtagagaagagctgttgattgatgcaaaggatattgaaaaagtacgcaca
ttgcggagagcgctgacaacgcttaagccagtagaaggcgcccagaagttgcttaattta
ttggataaatatcccactaatgccgagctattagatgcgtttttaccagcttcatga
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