Vreelandella titanicae: HZS52_17055
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Entry
HZS52_17055 CDS
T06950
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
htt
Vreelandella titanicae
Pathway
htt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
htt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HZS52_17055 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htt03400
]
HZS52_17055 (uvrB)
DNA repair and recombination proteins [BR:
htt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HZS52_17055 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HZS52_17055 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
UB2H
DUF87
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QNU61462
LinkDB
All DBs
Position
complement(3686510..3688534)
Genome browser
AA seq
674 aa
AA seq
DB search
MSKAFRLQSKFQPAGDQPAAIKGLISGLESGLAHQTLLGVTGSGKTFTMANVVEQQQRPT
IVMAPNKTLAAQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRAFLRRLAELQ
YTRNDMDFRRGTYRVRGDVIDIFPADSDEEAVRVELFDSEIDTIRLFDPLTGAVRGEVPR
MTIYPKSHYVTPRETILGAIDAIKEELKERLEWMRKHERLVEAQRLEQRTLYDIEMMLEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWEAISPQTIFVSATPGRYEGEHASQTVEQVVRPTGLLDP
EIEVRPASTQVDDLLSEIGLRTAVGERVLVTTLTKRMAEDLTEYFDEHGIRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNAHGKAILYGDRITDSMRKAIDETERRRAKQTAHNEEHGITPTTVTRSVADILEAAQ
APGKKSSRRRGNERKVAESAAEYDVTTMSKQDLLGAISKLEDAMFEAAQNLEFEEAARLR
DQLHQMKDKQLALG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcctttcgattgcagtcaaaatttcagcccgctggcgaccagcctgctgct
attaaagggctgattagtggcctggaatctgggcttgctcaccaaacgctgcttggcgtg
accgggtcgggcaaaaccttcaccatggccaatgtggtggaacaacagcagcgcccgacc
atcgtgatggcgccgaacaagaccctggctgcccagttgtatggcgaattcaaggcgttt
ttcccggataacgccgtagagtatttcgtctcctactacgactactaccagccggaagcc
tatgtgccttcctcggatacctttatcgagaaagatgcctcgataaacgaccatatcgag
cagatgcggctttcggccaccaaggcactgctagaaaggcgcgatgcgctgattgtggta
tcagtgtcagcgatttacggcttgggtgaccccgaccaatacttaaagatgcgtctgcac
ttcactcgcggcgagttgattgaccagcgcgctttcctgcggcgcttggcagagcttcag
tacactcgtaatgatatggatttccgccgcggtacttaccgggtgcgcggcgatgtgatc
gatatctttcctgccgactctgacgaggaggcggtgcgggtagagctgtttgacagcgaa
atcgacactatccgactgtttgatccgctcactggcgctgtccgcggggaggtgccaagg
atgactatctatccaaaatcgcactacgtcaccccccgggaaacgattctgggcgccatt
gatgccattaaagaggagctcaaagagcgactggagtggatgcgtaagcatgaacggctg
gtagaagcacagcgtcttgagcagcgcacactttacgatattgagatgatgctggagctg
ggttactgcaacggtatcgaaaactactcccgctacctctctgggcgtgcccccggcgag
ccaccgcctactttctttgattacctgcccgatgacgcactgctatttatcgacgagtcc
cacgtcagcgtgccccaggtaggtggtatgtacaaaggcgaccgttcgcgtaaagagacc
ctagtcgagtatggtttccggttgccttcggcgttggataaccggcccatgaagtttgaa
gagtgggaggccatttcaccacaaaccatctttgtttccgccactccaggccgctatgag
ggcgaacacgctagccagaccgttgagcaggtggtgcgtcccaccgggctgctggatcct
gaaattgaagtgcgtccggccagtacccaagtagacgatctgctatcggaaattggactg
cgcactgcagtaggtgagcgggtgctggtgaccacgctaaccaagcgtatggcggaagac
ctgaccgagtattttgacgagcacggcattcgagtgcgctatttacattcggatatcgac
accgtcgagcgggttgagattattcgtgacttacgcctgggcaagtttgatgtgttagtg
ggcatcaacctgctacgtgaaggcctggatattcccgaagtatcgttggtggcaattctc
gacgccgataaagagggctttctgcgtgccgagcgctcgctgatacagactattggccgt
gctgcccgtaacgcccacggcaaggcgattctttacggtgatcggattactgactcgatg
cgcaaggcgattgatgaaaccgagcgtcgtcgcgccaagcagactgctcataatgaagaa
cacggtattacgccaacaacggttacccgctcagtggccgatatccttgaagccgcccag
gcaccaggcaaaaagagcagtcgccgccgtggcaatgagcgcaaggtggcggaaagcgcc
gccgagtatgatgtcaccacgatgagcaagcaagatctgctgggcgctatcagtaagctc
gaagacgccatgtttgaggcagcacaaaatctggagttcgaagaggcggcccggcttcgc
gaccagctccatcaaatgaaagacaaacagctggcgctgggctag
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