Vreelandella titanicae: HZS52_19055
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Entry
HZS52_19055 CDS
T06950
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
htt
Vreelandella titanicae
Pathway
htt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
htt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HZS52_19055 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
htt02000
]
HZS52_19055 (msbA)
Enzymes [BR:
htt01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HZS52_19055 (msbA)
Transporters [BR:
htt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HZS52_19055 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_29
AAA_22
AAA_25
nSTAND1
RsgA_GTPase
DUF87
MMR_HSR1
AAA_30
AAA_24
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QNU61827
LinkDB
All DBs
Position
complement(4120956..4122692)
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AA seq
578 aa
AA seq
DB search
MTDSGWGIYKRLLGYVKPHWRAFALAIVGFVVYAASSTALAEMMKRLIDGIQNPDAAFRF
FLPLFVIIMFSARGLGTFLSTYFMAYVGRYVIHTLRCDVFAHLLHLPGWFFDHHSSGQLV
SRVTYHVEQVAGAATKAVTIILREGLFVVGLVLYLLWTNWMLTLLFLGVTPIIAVVVSYV
SKRFRRISKRIQHSMGDVTHIASEALSGYRVVRTHGAEPYEKQRFERVSEENRRQSMKEA
MTRAVSSPVILMLVAISMALLVWLAMAPSLMENMTPGEFVAFITAAALMIKPVRQLTEIN
GEIQKGLAAASELFGLLDMTPEEDSGKHIASRLNGDVVIDHVSFRYADDQPEVLHDINLR
IAPGELVAIVGRSGSGKSTLVSLLPRFYCPTQGSITIDGINVDEYALGPLRQQIALVSQQ
VTLFNASIADNIAYGVANPDPQAVQAAAEAAYAHEFIDKLPNGYATTVGENGVMLSGGQR
QRLAIARAIFKDAPLLVLDEATSALDTESERYIQKALERVCEGRTTLVIAHRLSTIERAD
RIVVMDQGRIIEEGSHQSLLDADGAYAALHQLQFQEAP
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
gtgactgattcaggttggggtatttataagcggttgttgggctatgtgaagccgcattgg
cgagcttttgcgctagcgatagtgggctttgtggtttacgccgcgtcgagtaccgcgctg
gcggaaatgatgaagcgattaattgatggcattcaaaacccagatgcggcgtttcggttc
tttctaccgctgtttgtaattattatgttttccgcccgggggttaggtacttttttaagc
acctacttcatggcctatgtgggccgctacgtgattcataccctgcgttgcgacgtgttt
gcccatctactccatctgccgggctggttttttgaccatcactccagcggtcaactggta
tcacgggtgacctaccacgttgagcaagtcgcgggggcggccaccaaagcggtgacgatt
attcttcgggaaggcctgttcgtcgtcggcttggtgctctatctactctggactaactgg
atgctaacactgctgtttctgggcgtgacgccgatcattgccgtggtggtaagctacgtc
agcaagcgctttagacgcatttcaaaacgcattcagcactccatgggcgatgtcacccat
attgcctcggaagcgctgtcgggctatcgggtagtgcgcacccacggcgcagagccgtat
gaaaagcagcgctttgagcgggtcagtgaagagaatcgccgccaaagtatgaaagaagcc
atgacccgtgcggtcagttcccctgtgattctgatgttggtggccatctccatggcgcta
ctggtctggctggccatggcaccctcgctgatggagaacatgacgcctggtgagtttgtg
gcctttattaccgcggctgccctgatgatcaagccggtacgtcaactgaccgagattaac
ggtgaaattcagaaaggcctggcggccgcgtcagagcttttcggattgctggatatgacc
cctgaagaggatagtggcaaacatattgccagccgtttaaacggcgatgtcgtgatcgat
catgttagcttccgctatgccgacgaccagcccgaagtcctgcacgatattaatctacgc
atagcaccgggcgaactggtggcgatagtcgggcgttcggggagcggcaagtccactctg
gtcagcttgctgccgcgtttttactgccccactcaaggcagtattactatcgatggcatt
aatgttgatgaatacgcgcttggcccactgcgccagcagattgctctggtgtcgcagcag
gtgacgctatttaacgcctcgattgccgataatattgcttacggggtggccaatcctgat
ccccaggctgttcaggctgcagctgaagccgcctatgcccatgagtttatcgataagctt
cccaatggttatgccaccaccgtgggtgaaaatggcgtgatgctctcgggcggccaacgc
cagcggctggcgattgcccgggcgatcttcaaggatgcgccgctactggtgctggatgag
gctacttccgcgttggatacagagtccgagcgctatattcaaaaagcccttgagcgagtc
tgtgaagggcgcaccacgctggtcatcgcccaccgcctctctaccatagagcgggctgac
cggattgtggtgatggatcaggggcgcattatcgaagaggggtcgcatcagtcgcttctg
gatgccgatggcgcctacgcggcgctgcatcaactgcagtttcaagaagcgccatga
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