Vreelandella titanicae: HZS52_19515
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Entry
HZS52_19515 CDS
T06950
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
htt
Vreelandella titanicae
Pathway
htt02024
Quorum sensing
htt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZS52_19515 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HZS52_19515 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htt03019
]
HZS52_19515 (hfq)
03036 Chromosome and associated proteins [BR:
htt03036
]
HZS52_19515 (hfq)
Messenger RNA biogenesis [BR:
htt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HZS52_19515 (hfq)
Chromosome and associated proteins [BR:
htt03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HZS52_19515 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
QNU61916
LinkDB
All DBs
Position
complement(4217654..4217902)
Genome browser
AA seq
82 aa
AA seq
DB search
MSKGQSLQDPYLNILRKERIPVSIFLVNGIKLQGQIESFDQFVILLRNTVSQMVYKHAIS
TVVPSRNVRLPAQDPAEQDAEI
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagggcagtcccttcaagacccgtacttgaacattctgcgcaaggagcgcatt
ccggtctctatctttttggtcaacggcattaagctgcagggccagatcgaatcgtttgac
cagtttgttatcctgctgcgcaataccgttagtcagatggtttataaacacgctatttcc
acggttgttccatctcgcaacgtacgcttgcctgcgcaagacccggcagagcaggatgcg
gagatttaa
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