Vreelandella titanicae: HZS52_20995
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Entry
HZS52_20995 CDS
T06950
Name
(GenBank) DUF4347 domain-containing protein
Organism
htt
Vreelandella titanicae
Pathway
htt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
htt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HZS52_20995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4347
DUF4214
Cadherin
Big_13
Trypan_PARP
Cadherin_3
Big_12
Big_9
PepX_C
Big_5
Motif
Other DBs
NCBI-ProteinID:
QNU62190
LinkDB
All DBs
Position
4556582..4562800
Genome browser
AA seq
2072 aa
AA seq
DB search
MNTPTRQTSPSQSTGRNEVIFVDPRVDDYQTLLNGVADDTEVILLDPNTSGVEQIAQSLA
QRGEFDAIHLVSHGSEGRLALGNSTLDSETLPGYASFLEQWGEALGPNGDILIYGCDVGA
GEQGLRFVEALARVTGADVAASDDLTGASNLGGDWDLETNVGVISANSLVNNFATSGFSG
VLTPAAGTITFGTAEADSNIAAQSPNPTATNVQGSGLDVEIVMISGESRIDLAREAGISD
DGSDLTLRAYSPPDEGVIDYVRFTSNGGGKFQLDSFEFEYLANTDNTFDVQAFAGGIQVG
SAVTIDVAGNDVTTANFGTDFQNIDEFRIVAGFAARTNYDNIVISNAVTPNSPPVFTTAN
NADIDETAISGTVVLADSDIEANDGDGGGIDSVTYSIVGGTGEDYFDINASNGEVTLNAA
GAAALDYETTASYTLTIQADDGESSNNTATQDITISVNDIAPAITAGQSFSVNESDTNST
SLGTVATTGDDNSVSYSIASGNTGNAFTIDGSTGEITLSDTSQLDASATGSYTLSVQATD
GNTASTQDVTINVTDDVAPSVTSIAPSGSPDANAASVDYTVTFSESVSNVSADDFTLTST
GTASGTISAVAGSGDSYTVSVTGISGEGDLRLDLNSGTDIDDGATNAPAGYTSGTAHSVD
LVKPSVTIVTSPTADGTYKAGDTVDITLTFSEAVTVTGTPQLTLETGATDRVIDYTAGSG
TNTLTFAYTVQAGDETSDLALAGSEILLNGGTLQDAEGNDAVVTLPTPGDANSLSANKDI
VIDAVAPSVTSIAPSGSPAANASSVDYTVTFSEDVDDVSIDDFLLNTTGSASGNIASISG
SGSSYTVTVDTITGEGDLRLDLNDGTDINDGAGNASEGFSSGTAHTVDVMNPSVTNVTST
NANGTYKAGDTVNITLAFSEAVTVSGTPQLTLETGATDRTIDYVAGSGTDELTFAYTVQA
GDESSDLALTNAGIILNGGSIRDAAGNDSELTLPTPGTANSLSANKDIVIDAVAPVITSV
SIPNSSHKIGDTVTVAITAGEPGLSLDAGTVNGVAVTDFTDQGGGSYTATYTVQEGDTSR
APGDDIPVNFVLFDAAGNSSSAYTTAISQSADVIDAARPTLDGAIVPSLATITDDQIGSG
GFTLTLNFNEAMNTGVAPTITFPTEDPTNTLTFNAGSWTDAKTYIATFDTADANEVINNV
DVRVSDAQDAAGNTLAAVTQNDLFSVVTATSPAIQAITSPTADGTFAVGSSIDITVTFDK
AVDFTANGGALTATLNTGATILLTNSDAANQTQFSGRYTVQEGETDTDGLNVASLTLTGG
ATLVAHNNGVAADLDTLPNGQNLADNTDLSIDANSPAASAPTLAADSDSGVSASDNLTHH
TTPTLTGTGAEAGASVTIRVDGISVGSATANGSGDWAFTLAEGDLSEGLNTIDTLVGDSA
GNTSSASAGLALTLDNTAPTANDDTTATVREDAGETLLTNVNGAGDKLTDNDTGADDTAP
ITAVNDRADALGSAVAGSNGGRFIIEADGTASFDPNGEFEALAHGDTLTTDVTVDIQDTA
GNTSTSTLSVTVEGINNAPTIATNAGPSVKAGRSVTLTTANLNEGDPDDAGDELTYTLNT
LPTSGTLLLDGTALAASETFTQQDIDNGLVTFTAGSSAGNASFDFTLADGGEDGVERVSG
TVTFTVEATPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP
EPEPEPEPEPEPEPIELANFVDIFTEKGWELPSELLEQLRNTATFVHYPEFDTVLTPIIR
LYNGILDRVAEREGLEYWVAQQNAEGSFNDIVQDFMLAEEVSTALQAMGSDNATFVDTLY
QAALGRAADESGRDYWVDILESNNGDRSEVARWFVQSQEYINANLPLVNGNKLLAWGVNL
EQMEMRSLGFDTGVTADQDDLAETLVRLYTGLAGESPNEATFNAWLESGQTPEALAASLL
ESEDLLTTGEPIDFEILIDTLYERVLNRSPDTAGEQYWQEVLQNGDASLTEMVMAFTDSN
EHKQLSRSEVDNYLDAANLVGVETDLESYLFG
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atgaatactcccacccgccaaacgtccccaagccaatcgactggtcgtaacgaagtcatc
ttcgtcgacccccgagttgacgattaccagacactgcttaacggcgtggccgacgatacc
gaggtcatactgttagaccctaacaccagcggcgttgaacaaatcgcccagtcgttagca
cagcgcggcgaatttgacgccatccacctggtttcccacggcagtgaagggcgcctagcg
cttggtaacagcacgcttgatagcgagactctgccgggttatgccagcttcctggaacaa
tggggcgaagcattggggccaaacggcgacatccttatttacggctgtgatgttggtgcg
ggcgagcagggactgcggtttgtggaagcgctagcacgggtaaccggggcggatgtggcc
gcttccgatgacttaaccggtgccagtaatcttggcggggattgggacttggagaccaat
gtaggtgtcatctcggccaatagcctagtaaacaactttgctaccagtgggttttctgga
gtgctcacgccggctgcaggaaccatcacgtttgggactgcggaggcggattccaatatt
gctgcacaatcacccaacccgactgcaacgaatgtacaaggatccggtctggacgttgaa
attgttatgatatctggggagtcgcggatagatcttgcccgggaggcgggcatatcggat
gatggaagcgatttgacgctgagagcgtactcgccaccagacgagggtgtcattgactat
gtgcggtttacatcgaatggtggtgggaaatttcaactcgattcatttgagttcgagtat
cttgcgaacactgacaacacctttgacgtccaagcgtttgccggtggtattcaagtcggg
tctgcggtcacaattgatgttgctggaaatgatgtgaccacggcaaactttggcacggat
tttcagaatatcgacgaattccgaattgtcgctggcttcgcagcgcgaaccaactacgac
aatatcgttatttccaacgcggtcacgccgaactcccctcccgtattcaccaccgctaat
aatgctgatatcgatgaaaccgccatcagtggcaccgtggtgctggcggatagcgatata
gaagcgaacgatggcgacggtggcggaattgattcggtcacttattcgattgtcggtggt
acaggggaagactactttgatatcaatgcttccaacggcgaagtcacgttaaatgccgcc
ggtgcagcagcgctcgactatgaaaccaccgcaagctacaccctgactatccaggccgat
gacggtgaaagtagcaacaacaccgcgacccaagacatcactatttcggtcaacgatatc
gccccggccatcaccgccggccaatcctttagcgttaacgagagcgataccaacagcact
tccctgggcacggtcgccactaccggtgacgataactcggtgagctactccatcgcgtcc
ggcaacactggcaacgccttcactatcgacggttccacgggcgagattaccctgagcgac
accagccagctcgacgccagcgcgaccggtagctatacgctcagcgtacaagccaccgat
ggcaataccgcatcaacgcaagatgtcaccatcaacgtcaccgacgatgtggctcccagc
gttaccagtattgccccaagcggttcacccgatgccaatgctgcatccgtcgattacacc
gttacctttagcgaaagcgtcagcaatgtctctgccgatgatttcacccttacctccacc
ggcaccgcctctggcacgattagtgcggttgctggcagcggtgacagctatacggtcagc
gttaccggtattagcggtgaaggtgacctgcgcctggatcttaacagtggcaccgatatc
gacgatggggccaccaatgccccggcaggctacaccagcggtacggctcacagcgttgat
ctggtcaagccgagcgtcaccatcgtcacctcaccgacggccgacggtacttataaagcg
ggtgacaccgttgatattacgctgacctttagtgaagctgtgaccgtcaccgggacgccg
cagctaacgctggaaaccggggcaactgaccgagtcattgactatacggcgggctccggg
actaacacgctgacgttcgcgtataccgttcaagcaggcgatgaaaccagcgatctggcg
ctggcgggcagcgagatcctgctcaatggaggtacccttcaggatgccgaaggcaacgac
gcggtggtcaccctacccacaccgggtgacgcgaactcgctaagtgctaacaaggacatt
gtcatcgatgccgtcgcgcccagcgttacgagtattgcgcccagtggttcacctgcggcc
aatgcttcctcagtggattacaccgttacctttagcgaagacgtcgacgatgtttctatc
gatgacttcctactcaacaccaccggcagcgcttcgggtaatatcgcctccatttcaggt
tccggcagtagctacaccgtcactgtggataccattactggcgaaggcgacttgcgcctt
gacctgaacgacggcaccgacatcaatgatggtgcaggcaatgcctcggagggcttctcc
agcggcactgcacataccgttgacgtgatgaacccgagtgtaaccaatgtcacctcgacg
aatgccaacggtacttataaagcgggcgacaccgttaacatcaccctagcgttcagcgaa
gcagtgacggtcagcggtacaccgcagttgacgctggaaaccggggcaacggatcgcacc
atagattacgtggctggctcaggtaccgacgagctgacgtttgcgtataccgtccaggcg
ggggatgagtccagtgatctggcgctgaccaacgctggaatcattctcaatggcggctca
attcgcgatgcagcaggcaacgacagcgaactcaccctgcccacaccggggactgccaac
tcgctcagcgccaacaaagacatcgtcattgatgccgtagcgcccgtcatcaccagcgtt
tctattccgaatagcagtcataaaatcggtgataccgtgaccgtcgctattaccgcggga
gagccaggcttgtcgctggacgccggtacggtgaacggggtagcggtcaccgattttacc
gatcagggcggcggcagctataccgccacttacacggtacaggagggggatacatcccgc
gccccaggcgacgatattcccgttaactttgtgctgttcgatgcggcaggcaatagctct
agtgcttacactactgctatcagccagagtgctgatgtcatcgacgcggctcgccccacc
ctggatggcgctattgtaccgtcgctcgccaccattacggacgaccagatcggcagtggc
ggttttaccctgacgctgaacttcaacgaagcgatgaatactggcgtcgcacccacgatc
accttcccaacggaagatcccacaaacacgcttacctttaacgccggcagttggacggat
gccaagacctatatcgccaccttcgacaccgccgatgccaatgaagtgatcaataacgtg
gatgtgcgagtcagcgatgctcaggatgcggcgggcaatacgcttgccgccgtaacgcaa
aacgacctcttcagcgtggttaccgccaccagcccggcgattcaggcgattacctcgccc
accgccgatggcacctttgcggtgggcagcagcattgatatcaccgtgacgttcgataaa
gcggtcgactttactgccaacggcggcgcgctaacggctacactcaacaccggcgcaacg
atccttctcaccaatagcgacgccgctaaccaaacgcagtttagtggccgttatacggtg
caagagggtgagacggacaccgatgggcttaacgtcgcctcgctaaccctgaccggcggt
gccacgctggtcgcccacaataacggcgtagcggcggaccttgatacgctgcccaatggg
caaaaccttgccgacaatacggatttgtcgattgatgccaattcgcctgctgcttcagcg
cccacgctcgcggcggattccgatagcggcgtgagcgctagcgataatctcacccaccac
acaacgcccaccctgaccggcaccggggccgaagcgggagccagcgttacaatacgggtc
gacggcatcagcgtgggtagcgccaccgccaatggcagcggtgactgggccttcaccttg
gccgaaggcgatctgagcgaaggcctcaacacgatcgatacgctggttggcgatagcgca
ggtaataccagcagcgcatcagcgggtcttgcgctaaccctggataacaccgcgcccacc
gccaatgatgatacaacggccacggtacgtgaagacgcgggggagaccctgctgaccaac
gttaacggagccggcgataagctcaccgataacgacacaggcgcagacgacacggcccct
atcaccgctgtgaatgaccgtgccgatgccctgggcagcgcggtggcgggcagcaacggc
gggcgctttattatcgaagccgatggcacggctagcttcgaccccaatggtgagtttgaa
gcccttgcccacggtgacacgcttaccaccgatgtcaccgtcgacattcaagacaccgca
ggcaataccagcacgtccacccttagcgtgacagtggaaggcatcaataatgcacctacc
atcgccaccaacgcaggccccagcgtaaaagccggccgtagcgtcacattaacgacggcc
aacctgaatgaaggcgatccggatgatgctggcgatgagctcacttatacactgaacacc
ctgccaacgtccggtacgttattgctcgatggtaccgccttagccgcgagcgagacgttt
acccaacaagacatcgacaatggcttggtgacatttaccgcgggcagcagtgcgggcaat
gccagctttgactttaccctggctgatggcggcgaggatggtgtggaaagggtctctgga
actgtgacctttacggtggaagcaacaccggagcccgagcctgagcctgaaccagaacct
gagcctgaaccagaacctgagcctgagcctgaaccagaaccagaaccagaaccggagcct
gagcctgaacccgagccagagccagagcccgagcccgagcctgaacccgaaccagagcct
gaacccgaacctgaacccgagccagagcctgaacccgagccaattgagctcgccaacttt
gttgatatattcactgaaaagggatgggaattgccatctgagctcttggaacagctacgt
aataccgccacctttgtgcattaccctgagttcgatacggtgctgacacccattatccgt
ttatacaacggcattcttgatcgcgttgctgaacgggaaggcttggagtactgggtggcg
cagcaaaatgcagaaggcagcttcaacgatattgttcaggactttatgttagcagaagag
gtgagcaccgcgttacaagccatgggcagcgataatgccacctttgtggatacgctttat
caagccgcactaggccgcgccgcggatgagagcggccgcgattactgggtagacatcctt
gagagcaacaacggggatcgtagtgaggtcgcccgttggtttgtccaatcacaggagtat
atcaacgccaaccttcctctagtgaacggcaataagctgctggcctggggcgtgaaccta
gaacaaatggaaatgcgctcgctgggttttgataccggcgtaacggccgatcaagacgac
ttagcggagacgttagtccggctttataccggcttagccggagagtcacctaatgaggcg
acgtttaatgcatggctggagagtggccaaacgccagaagcactagcggcaagcctactg
gaaagcgaagacttgctaaccaccggagaaccgatagattttgagatattgatcgatacg
ctttatgagcgggtgctaaatcgctcaccggacaccgcaggtgagcagtattggcaagag
gtgctgcaaaacggagatgccagcctgactgaaatggtgatggcgtttactgactcaaac
gagcacaagcagctcagtcgttcagaagtggataattatcttgatgccgccaacctggta
ggcgtcgaaactgaccttgagtcctacctgttcggctag
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