Haloterrigena turkmenica: Htur_0415
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Entry
Htur_0415 CDS
T01154
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K07466
replication factor A1
Organism
htu
Haloterrigena turkmenica
Pathway
htu03030
DNA replication
htu03420
Nucleotide excision repair
htu03430
Mismatch repair
htu03440
Homologous recombination
htu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
htu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Htur_0415
03420 Nucleotide excision repair
Htur_0415
03430 Mismatch repair
Htur_0415
03440 Homologous recombination
Htur_0415
03460 Fanconi anemia pathway
Htur_0415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htu03000
]
Htur_0415
03032 DNA replication proteins [BR:
htu03032
]
Htur_0415
03400 DNA repair and recombination proteins [BR:
htu03400
]
Htur_0415
Transcription factors [BR:
htu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Htur_0415
DNA replication proteins [BR:
htu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Htur_0415
DNA repair and recombination proteins [BR:
htu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Htur_0415
MMR (mismatch excision repair)
Htur_0415
DSBR (double strand breaks repair)
HR (homologous recombination)
Htur_0415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
Ssb-like_OB
CDC24_OB3
OB_MEIOB_N
POT1PC
HROB
Motif
Other DBs
NCBI-ProteinID:
ADB59315
UniProt:
D2RV22
LinkDB
All DBs
Position
442413..443876
Genome browser
AA seq
487 aa
AA seq
DB search
MSDIEGVYEDLEADVSLEEFREAVEAKVEQMGGLADEETAAMLVAHEIGESEVGGIADIE
PGMEEAKFVAKVLSIGDVRTFERDGEDEDGRVVNVEVADETGSVRAAFWDEHAEAATEEL
EEGQVLRIKGRPKEGFSGVEVSVDDVEPDPDTEIDVQVSDTHTVEALSLGLSNVNLVGLV
LDTDSVRTFDRDDGSEGKVSNLVLGDETGRIRVTLWDEQADLATEFDPGETVEVIDGYVK
ERDGNLELHVGNRGAVEEVDEEVEYVPESTPIEDLEIGQTVDIAGVVRSADPKRTFDRDD
GSEGQVRNIRVQDATGDIRVAMWGEKADLDVGPGDEVALGDVEIQDGWQDDLEASAGWQS
TITVLESDSGSSGGESAADDASNENAGLSAFGGDADGPAEEESETSAASSDDARGTTGAN
ADAETDEPTDGEELEFTGVVVQAGDPVVLDDGESTMSVATDADVGLGEEVTARGIVRDGR
LEANDVF
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcgagggcgtgtacgaagacctcgaggccgacgtttctctcgaggagttt
cgcgaggccgtcgaggcgaaagtcgagcagatgggcggactcgcggacgaggagacggcg
gcgatgctcgtcgctcacgagatcggcgagagcgaggtcggcggcatcgccgacatcgaa
cccggcatggaggaggcgaagttcgtcgccaaagtgctctcgatcggcgacgtacggacg
ttcgaacgcgacggcgaggacgaggacggccgcgtcgtcaacgtcgaggtcgccgatgag
actggctccgtccgggccgccttctgggacgagcacgccgaggccgccaccgaggaactc
gaggagggccaggtactgcgaatcaaggggcgtcccaaggagggcttttccggcgtcgag
gtcagcgtcgacgacgtcgaaccggatccggacacggagatcgacgtccaagtttcggac
actcacaccgtcgaggccctctcgctcggtctctcgaacgtcaacctcgtcgggctggtc
ttagacaccgacagcgtccgcaccttcgaccgcgacgacggctccgaggggaaggtgtcg
aacctcgtcctcggcgacgagaccggccgcatccgcgtcacgctgtgggacgagcaggcc
gacctcgcgaccgagttcgaccccggcgagaccgtcgaggtgatcgacggctacgtcaag
gaacgcgacggcaacctcgagctccacgtcggcaaccgcggcgccgtcgaggaagtcgac
gaggaggtcgagtacgtccccgagagcacgcccatcgaggacctcgagatcggccagacg
gtcgacatcgcgggcgtcgtccgctctgcggaccccaagcggaccttcgaccgcgacgac
ggctccgagggccaggtccggaacattcgcgtccaggacgcgaccggcgacatccgcgtc
gcgatgtggggcgagaaggccgatctcgacgtcgggccgggcgacgaggtcgcactcggc
gacgtcgagatccaggacggctggcaggacgacctcgaggcctccgcgggctggcagtcg
acgatcacggttctcgagtccgactccggcagttccggcggcgagagcgctgcggacgat
gcgagcaacgagaacgccggtctctcggcgttcggtggcgatgccgacggcccagccgag
gaggaaagcgaaacaagcgccgcctcgagcgacgacgcccgtggcaccaccggtgccaac
gccgacgccgaaaccgacgagccgaccgacggcgaggaactcgagttcaccggcgtcgtc
gtgcaggccggcgacccggtcgtactggacgatggcgagtcgacgatgagcgtcgcgacc
gacgccgacgtcggcctcggcgaggaggtcaccgcccgcgggatcgtccgggacggtcgc
ctcgaggcaaacgacgtgttctga
DBGET
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