Haloterrigena turkmenica: Htur_0478
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Entry
Htur_0478 CDS
T01154
Name
(GenBank) Transcription factor TFIIB cyclin-related protein
KO
K03124
transcription initiation factor TFIIB
Organism
htu
Haloterrigena turkmenica
Pathway
htu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
htu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Htur_0478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htu03021
]
Htur_0478
Transcription machinery [BR:
htu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Htur_0478
Prokaryotic type
Archaeal type
TFB
Htur_0478
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_RRN7
Cyclin_N
Sigma70_r4
DUF7558
Trm112p
Motif
Other DBs
NCBI-ProteinID:
ADB59376
UniProt:
D2RVL2
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All DBs
Position
complement(497198..498157)
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AA seq
319 aa
AA seq
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MARPSRQRERESASTETTDQRERERACDECSDGTLVTSEDQGELVCDQCGLVVEGSNIDH
GPEWRAFNHSERQSKSRVGAPTTQTMHDKGLTTSIDWKNQDAYGRSISADKRSQMRRLRK
WQERIRTKDAGERNLQFALSEIDRMASSLGIPRSVREVACVIYRRALDEDLIRGRSIEGV
ATSTLYAACRMEGIPRSLEEVAAVSRVERKEIGRTYRYVAQELSLEMEPVDPKQYTPRFC
SELDLSEEVQAKATEIIDTTTEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREIAEVAQ
VTEVTIRNRYQEQIEAMGI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcccatcccgccagcgcgaacgcgaatcagcatcgaccgaaaccacagatcaa
cgcgagcgcgagcgggcgtgtgacgagtgttccgacggaacgctcgtcacgagcgaggat
cagggcgaactcgtctgcgatcagtgcggactcgtcgtcgaaggctcgaacatcgaccac
ggcccggagtggcgcgcgttcaaccactcggagcgacagagcaagtcccgcgtcggcgcg
ccgacgacccagacgatgcacgacaaggggctgacgacctccatcgactggaagaaccag
gacgcctacggccgctcgatctctgcggacaagcgcagccagatgcgccgcctgcgcaag
tggcaggaacgcatccgcaccaaggacgccggcgaacgcaacctacagttcgccctcagc
gagatcgatcggatggcctcctcgctgggcattccccggtcggtccgcgaggtcgcctgc
gtcatctaccgccgcgcgttagacgaggacctcatccgcgggcgctccatcgagggcgtc
gccaccagcaccctctacgccgcctgccgcatggagggcattccccgcagcttagaggag
gtcgccgccgtctcccgcgtcgagcgcaaggagatcggccgcacctaccgctacgtcgcc
caggagctcagcctcgagatggagcccgtcgatccgaaacagtacacgccgcgcttttgc
tcggagctcgacctctcggaggaggtccaggccaaggccaccgagatcatcgacacgacg
accgagaagggactgctgtcgggcaagtcgcccacgggctacgccgccgccgcgatctac
gccgcctcgctgctctgtaacgagaagaagactcagcgcgaaatcgccgaggtcgcgcag
gtgaccgaggtgacgatccggaatcggtatcaggagcagatcgaagcgatgggtatctag
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