Haloterrigena turkmenica: Htur_2178
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Entry
Htur_2178 CDS
T01154
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
htu
Haloterrigena turkmenica
Pathway
htu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
htu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Htur_2178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htu03019
]
Htur_2178
03009 Ribosome biogenesis [BR:
htu03009
]
Htur_2178
04131 Membrane trafficking [BR:
htu04131
]
Htur_2178
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
htu04147
]
Htur_2178
Messenger RNA biogenesis [BR:
htu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Htur_2178
Ribosome biogenesis [BR:
htu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Htur_2178
Membrane trafficking [BR:
htu04131
]
SNARE
SNARE associated proteins
Others
Htur_2178
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Htur_2178
Exosome [BR:
htu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Htur_2178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
CDC48_2
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
IstB_IS21
RNA_helicase
AAA_28
Mg_chelatase
AAA_7
AAA_lid_PRS2_C
AAA_18
AAA_17
ABC_tran
AAA_3
DUF815
Sigma54_activat
NB-ARC
AAA_24
ATPase
Parvo_NS1
AAA_30
TsaE
SLFN-g3_helicase
AAA_11
Vps4_C
PhoH
NACHT
IPT
DUF6985
Harpin
Motif
Other DBs
NCBI-ProteinID:
ADB61059
UniProt:
D2RTV8
LinkDB
All DBs
Position
2255828..2258059
Genome browser
AA seq
743 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKADKLTLAPPEEASVQFGSDAAGMVKRQIL
KRPVVGRDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVVLITEDTDVELREEPISGFE
KTGGGITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVDLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKRQDFRGALNEVEPSAMREVLVELPKISWDDVGGLHSAKEQVQESVEW
PLSNPERFDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDALAPGRGGETGSNVSERVVNQLLTELDGLEEMENV
MVIGATNRPDMIDPALLRSGRFDRLVMIGEPDVDGRERILEIHTENTPLAADVTLREIAE
ITDGYVGSDLESIAREAAIEALREDEEADIVEMRHFRQAMENVRPTITDDILDYYEQIEE
EFQGGGSGGPGPTGRRDSRIGFQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagttcaactggaggttgcgaaggcgtacccgaacgactcgggtcgtggtatc
gcccgactcgacccggacacgctgttgcatctgaagctgagtccgggcgacatcatcgaa
atcgaaggcgccgacaccaccgccgcgaaggtgtggcgcgccgaccggcaggactggaac
accgatacggtccgcatcgacgggttcacccgtcagaacgccgacgtggggatcggcgaa
cgcgtaacgatccgcaaggcggaagccacgaaggcggataagctcaccctcgcacccccc
gaggaggcgtcggtccagttcggttccgacgccgccggcatggtgaaacgacagatcttg
aagcggccggtcgtcggccgcgacatcgtcccggtcatgtcctcgacgaaccatccgttc
atgcggtcgcccggccaggcgatcccgctcattgccgtcgagacggaacccgagggcgtg
gtcctcatcaccgaggacaccgacgtcgagcttcgcgaggagcccatctcgggcttcgag
aagaccggcggcggcatcacttacgaggacatcggcggcctgcaaagcgagatccagcgg
gtcagggagatggtcgaactcccgatgaaacacccgcagatcttcaagaagctcggcatc
gagcccccgcagggcgtcctgctccacgggccgccgggcaccgggaagaccctgctcgcg
aaggccgtcgccaacgagacctccgcgagcttcttctcgatcgcggggccggagattatc
tccaagtactacggcgagtccgaacagcagttacgcgagatcttcgaggacgcgaccgag
gagtcgccgtcgatcatcttcatcgacgaactcgactccattgcgcccaaacgcgaggac
gtcaccggcgaggtcgaacgccgcgtcgtcgcccagctgctgactatgatggacggcctc
gagtcccgcggtcaggtcatcgtcatcgcggcgaccaaccgcgtggactcggtcgacccc
gccctgcgccggccgggtcggttcgaccgcgagatcgagatcggcgtcccggacgaggtc
ggccgcgaggagatcctgcagatccacacccgcggaatgcccctctcggacgacgtcgac
ctcggtcacctggccgacgagacccacggcttcgtcggcgccgacatcgagagcctcacg
aaggaggccgcgatgaaggcgctccggcgctacctgccggagatcgatctcgacgaggag
gacatcccgccgagcctgatcgaccggatgatcgtcaagcgccaagacttccgcggcgcg
ctcaacgaggtcgaaccctcggcgatgcgggaggtgctcgtcgaactcccgaagatctcc
tgggacgacgtcggcggtctccacagcgccaaggaacaggtccaggagtccgtcgagtgg
ccgctgtcgaaccccgagcggttcgaccggctgggggtcgatccgccggccggcgtgttg
ctgtacggaccgccgggcaccgggaagacgctcatggcgaaagcggtcgccaacgagacc
aacgcgaacttcatctcggtgcgcggcccgcagctgctcagcaagtgggttggcgaatcg
gagaaggccatccggcagaccttccgcaaggcgcggcaggtctcgccgacggtcatcttc
ttcgacgagctcgacgcgctcgcgccgggccggggcggtgaaaccggctcgaacgtctcc
gagcgggtcgtcaaccagctcctgacggagctcgacgggctcgaggagatggagaacgtg
atggtcatcggcgcgaccaaccggccggacatgatcgaccccgcgctgctgcgctcgggt
cggttcgaccgactggtcatgatcggcgaacccgacgtcgacggccgcgaacgcatcctc
gagatccacaccgagaacacgccgctggccgcggacgtcacgctacgcgagatcgccgag
atcaccgacggctacgtcggcagcgacctcgagtcgatcgcccgcgaggcggctatcgag
gccctgcgcgaggacgaggaggcggacatcgtcgagatgcgccacttccgacaggccatg
gagaacgtccgcccgacgatcacggacgacatcctcgactactacgagcagatcgaagag
gagttccagggcggcggatcgggcggccccggaccgacgggtcgccgcgacagtcggatc
ggcttccagtaa
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