Haloterrigena turkmenica: Htur_2570
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Entry
Htur_2570 CDS
T01154
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
htu
Haloterrigena turkmenica
Pathway
htu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
htu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Htur_2570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htu03019
]
Htur_2570
03009 Ribosome biogenesis [BR:
htu03009
]
Htur_2570
04131 Membrane trafficking [BR:
htu04131
]
Htur_2570
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
htu04147
]
Htur_2570
Messenger RNA biogenesis [BR:
htu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Htur_2570
Ribosome biogenesis [BR:
htu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Htur_2570
Membrane trafficking [BR:
htu04131
]
SNARE
SNARE associated proteins
Others
Htur_2570
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Htur_2570
Exosome [BR:
htu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Htur_2570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_33
AAA_22
AAA_14
RNA_helicase
NPHP3_N
nSTAND3
AAA_28
AAA_7
DUF815
Mg_chelatase
AAA_25
ABC_tran
IstB_IS21
AAA_3
NB-ARC
TsaE
AAA_24
AAA_17
AAA_11
AAA_18
Zeta_toxin
Parvo_NS1
ATPase
AAA_lid_PRS2_C
AAA_30
Sigma54_activat
PhoH
SLFN-g3_helicase
bpMoxR
Bac_DnaA
Vps4_C
ATP-synt_ab
Zot
HJURP_C
Motif
Other DBs
NCBI-ProteinID:
ADB61447
UniProt:
D2RW18
LinkDB
All DBs
Position
complement(2640956..2643220)
Genome browser
AA seq
754 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRVSMRELDLENGDYIVIEGTGDSQAVARVWPGYPEDEGR
GIIRIDGRLRQEADVGIDDNVSVEPADVNPAKSVTVALPQNLRIRGDIGPLVRDKLSGQA
VTEGQTVPFSLSFGPMASSGQSVPLKIASTSPSGTVVITDSTNIEISETPAEQVSSGSGA
SAEGVPNVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR
EDAGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEIGVPD
KDGRKEILQVHTRGMPLQESIDLDQYAENTHGFVGADLESLVREGAMNALRRIRPDLDLE
EDEIDAEILETLEVTEDDFKDAIKGIQPSAMREVFVEIPDVTWDDVGGLEDTKERLRENV
QWPLDYPEVFDELDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVG
ESEKGVREVFEKARSNAPTVIFFDEIDSIAGQRGRQQSDSGVGERVVSQLLTELDGLEEL
EDVVVIATTNRPDLIDNALLRPGRLDRHVHVPVPDEEGRRKIFEVHTRGKPLADSVDLDW
LAAETEGYVGADIEAVTREASMAASREFINSVDPEEMADTIGNVRISKEHFEHALEEVNP
SVTPETREQYEEIEEQFDTAEPAQEEDQLGRTFQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgttaaaccactgaaacagaaggacgccggccgcggactcgccgcgatc
gatcgcgtctcgatgcgcgaactcgatctcgagaacggcgactacatcgtaatcgagggc
acgggcgacagccaggccgtcgcgcgcgtctggcccggataccccgaagacgaggggcga
gggatcatccgaatcgacggccgcctccgccaggaggccgacgtcgggatcgacgacaac
gtcagcgtcgagcccgccgacgtcaaccccgccaagtcggtcacggtcgcgctgccccag
aacctccgcattcgcggagacatcgggccgctcgtccgcgataagctgagcggacaggcc
gtcaccgagggccagacggtgccgttctcgctctcgttcggtccgatggccagctccggc
cagtcggtgccgctgaagatcgcgagcacctcgccgtcgggcacggtcgtcatcacggac
tcgacgaacatcgagatctccgagacgcccgccgagcaggtcagctcgggtagcggcgcc
tccgccgagggcgtcccgaacgtcacctacgaggacattggcggcttagacgacgaactc
gaccaggtccgcgagatgatcgagctgccgatgcgccaccccgagctgttccagcagctc
ggcatcgagccgccgaagggcgtcttgctgcacggcccgccgggcaccgggaagaccctg
atggccaaggccgtcgccaacgagatcgacgcccacttcgagacgatctccggtccggag
atcatgtcgaagtactacggtgagagcgaggagcaactccgcgaggtcttcgaagaggcc
gaggagaacgcccccgcgatcatcttcatcgacgagctcgactcgatcgccgccaagcgc
gaagacgccggcggcgacgtcgaacgacgcgtggtcgcccagctcctcagcctgatggac
ggcctcgaggaacgcggtcgcgtcaccgtcatcgcggcgaccaaccgcgtcgacgacatc
gatcccgcgctccgccgcggcggtcgcttcgaccgcgagatcgagatcggcgtcccggac
aaggacggccgcaaggagatcctgcaggtccacacccgcgggatgccgctccaggagtcg
atcgacctcgaccagtacgccgagaacacccacggcttcgtcggggccgacttagagagc
ctcgtccgcgagggcgcgatgaacgccctgcgtcgcatccgtcccgacctcgacctcgag
gaggacgagatcgacgccgagatcctcgagaccctcgaggtcaccgaggacgacttcaag
gacgcgatcaagggcatccagccctcggcgatgcgggaggtcttcgtcgagatccccgac
gtcacctgggacgacgtcggcggcctcgaagacaccaaggagcgcctccgcgagaacgtc
cagtggccgctggactaccccgaggtgttcgacgaactcgacatgcaggccgccaagggc
gtcctcatgtacggcccgccgggtacggggaagaccctgctcgcgaaggccgtcgccaac
gaggcccagtcgaacttcatctcgatcaagggccccgaactgctgaacaagtacgtcggg
gagtccgagaagggcgtccgtgaggtcttcgagaaggcgcggtcgaacgcaccgaccgtg
atcttcttcgacgagatcgactcgatcgcgggccagcgcggccgccagcagagcgactcc
ggcgtcggcgaacgcgtcgtcagccagctgctgaccgaactcgacggcctcgaggaactc
gaggacgtcgtcgtgatcgccacgaccaaccggccggacctgatcgacaacgccctgctc
cgtcccggacggctggatcgccacgtccacgtgcccgtccccgacgaggagggtcgtcgg
aagatcttcgaggtccacacccggggcaagcccctggccgactcggtcgacctcgactgg
ctcgccgcggagacggagggctacgtcggcgccgacatcgaagccgtcacgcgcgaggcc
tcgatggccgccagccgcgagttcatcaactcggtcgaccccgaggagatggccgacacc
atcggcaacgtccgcatcagcaaggagcacttcgagcacgccctcgaggaggtcaacccg
agcgtgacccccgagacccgcgagcagtacgaggagatcgaagagcagttcgacaccgcc
gaaccggctcaggaagaggaccagctcggtcgcaccttccagtaa
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