Haloterrigena turkmenica: Htur_3094
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Entry
Htur_3094 CDS
T01154
Name
(GenBank) Exoribonuclease II
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
htu
Haloterrigena turkmenica
Pathway
htu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Htur_3094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htu03019
]
Htur_3094
03016 Transfer RNA biogenesis [BR:
htu03016
]
Htur_3094
Enzymes [BR:
htu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Htur_3094
Messenger RNA biogenesis [BR:
htu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Htur_3094
Transfer RNA biogenesis [BR:
htu03016
]
Prokaryotic type
tRNA degradation factors
Htur_3094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ADB61959
UniProt:
D2RYZ1
LinkDB
All DBs
Position
complement(3176953..3178251)
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AA seq
432 aa
AA seq
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MSNDAQAEAGTAEAQGPVEVSEDLARHLENKREELFEKFELRDEFPAEVLEEAEARTEGV
TAEISDEIDERKDLRDLTTWTTDPIDAQDFDDALSIEERDDEYVLWVHIADVTHYVNPDT
AMWDEAVERGNTVYLPGYTVHMLPPVLAETVCSLVANEDRLAHTVEMHLDKENLSYENIE
IYKSVIQSDERLTYSQAENRLEDPDADLHEENTLVYEVANRMHEQRKEDGSLVLNPSRDR
AHTIIEECMLKANKAVTHELMWNRGVEAMYRVHPQPSPDEWSEALREIQDLDGVSIPGDT
WDDPRKAVNATLEEAPGRQLDKIQWAVMKVMPRAKYMNDPFGGHHALNFEIYGHFTSPIR
RLSDLINHWIVYQNDVPENLIELCDRASDKQKDAEQCEREYKNFLQEVGLDPMAVNNRGI
EIVDDDEADKTL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgacgcacaggccgaggccgggacggccgaggcccagggcccggtcgaagtc
tcggaggacctcgcgcgccacctcgagaacaaacgcgaggaactcttcgagaagttcgaa
ctccgcgacgagttccccgccgaggtcctcgaggaggccgaagcccgaacagagggcgtg
acggccgagatcagcgacgagatcgacgaacggaaggatctgcgagatctgacgacctgg
acgacggacccgatcgacgcccaggacttcgacgacgcgctctcgatcgaggagcgcgac
gacgagtacgtcctctgggtccacatcgccgacgtcacccactacgttaatcccgacacg
gcgatgtgggacgaggccgtcgaacggggcaacacggtctacctgcccggctacacagtc
cacatgctgccgccggtgctcgccgagacggtctgttcgctggtcgctaacgaggaccga
ctcgcccacaccgtcgagatgcacctcgacaaggagaacctctcctacgagaacatcgag
atctataagtcggtcatccagtccgacgagcgcctgacctattcgcaggccgaaaatcga
ctcgaggaccccgatgccgacctccacgaggagaacacactggtctacgaggtcgcgaat
cgaatgcacgaacagcgcaaggaggacggctcgctcgtcctgaacccgagccgcgaccgg
gcccacacgatcatcgaggagtgcatgctgaaggccaacaaggccgtcacgcacgagctg
atgtggaatcgcggtgtcgaggcgatgtaccgggtccacccccagcccagccccgacgag
tggtccgaagccctccgcgaaattcaggacttagacggcgtctcgatccccggcgacacg
tgggacgacccgcgaaaggcggtcaacgcgacgctcgaggaggcgcccggccggcaactc
gacaagatccagtgggcggtgatgaaggtgatgccccgcgcgaagtacatgaacgacccc
ttcggcggccaccacgcgctgaacttcgagatctacggccacttcaccagccccatccgc
cggctcagcgacctgatcaaccactggatcgtctaccagaacgacgtccccgagaacctg
atcgaactctgcgaccgcgccagcgacaagcagaaggacgccgagcagtgcgaacgggag
tacaagaacttcctccaggaggtcggcctcgacccgatggcggtcaacaaccgcgggatc
gaaatcgtggacgacgacgaagccgacaagacgctgtag
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