Haloterrigena turkmenica: Htur_3206
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Entry
Htur_3206 CDS
T01154
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
htu
Haloterrigena turkmenica
Brite
KEGG Orthology (KO) [BR:
htu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htu03400
]
Htur_3206
Enzymes [BR:
htu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Htur_3206
DNA repair and recombination proteins [BR:
htu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Htur_3206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
UCH_UBL1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
ADB62071
UniProt:
D2RZN2
LinkDB
All DBs
Position
complement(3297610..3301482)
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AA seq
1290 aa
AA seq
DB search
MAEDEDARGPRSDAEETAGSSVADALSALEPKGNQRAVIESRADCTSVDAGAGTGKTTTM
LMRIERAIERGEVDPDDVLVLTFANEAAGSIREAVAERLDPAAAAAIDVYTYHSFCYRLV
RDYAYYLGYSPEFDVVTERKRRRIVGRLLATNDYGFATATRGDGSPDDLTAAVDDFIQSM
SQEDVTPDELRERLPEVRTLELCNEFVLWLERTAGQDLSFDNEALRYFNADDHLEESRSS
LVEYGKLLEYCREKIAEAPEPFREDAVVRDIDRYLRVMQDTVTNAIEALSLEDRMTKQLP
RALFGNEIWRTATERIEQSPFGRLKHYVEFLRLARHYTDVYADYHDALAEEGALDFDELV
RTATGLLEDGAEHRSADGSNGSATRETIADEITGEWTQVYCDEFQDTDETQFALITELTD
GPDRPDLLAIGDKDQAIYGWRGTDREGLDRLADAYDDHRGIELELNFRSRQEILDLTNHC
DYGSQSSKRLREVGRTPGEYRTDSDATAGRETGFETDEDRPDRVVKIESDAVGPSPADQV
ATTVSRLLNGEAENVPRRSLEDIAVIVRTNRHAQAVADELRERRIPYEISGSPRGEIDPG
IRTLVSYLRVLVDPDADAHLRRVLLYRYRLSEADLATLQRADGSLYDAVMAVGPDAEVES
TALEDPDRVRRARDHLAKLEDVRDVYPLSGFVQRFREVTRLEWFLTSEEREELERVERFV
DAYTGDSVIGTLTPSFVDALERTLQGGGSERTRGTQSADSIDVMTVHQAKGLEFDTVLVP
YLSDEEWCVERDYAQRARYRLLAATLDDEIESPLLADLATETVGEEWRVLHVALTRAENH
LFVFGSVYDYDGDEDELGCATADACLSGDIEWSVAGERMELWSSLRASFERVRETYPETV
VDRTDELAAAASVDPGTITYYAGYDDRYVEPLETRDAIRTVHRLGRLLRGETLLPAADAA
SHALEAFGRFGTDRGDEGDAAAEIGEADSTRRVPTGRRLSALTTDTVRFPVETLSNATTL
PVALRHSYTALETHDTCPRKHYLDHVVRAFDDPTAGVGGTTARPETDAATATDSPLESGS
RLVGTVFHDVAEEAFYREYRTREAWREAAVRQLTARDLLEYREGVLGCIDRFFEAAAADY
DAPVADWEPVAAELPFSLEDVADVTGDVVGYIDSIRRTPDGELAVLDYKATAERIAPADA
TQLALYARACERRFDEPVAAVGYVYVSEAVGPRVDLLDADELPPWPTVRERLAAVDDPSF
VETTPGDHCQYCPHRSLGCGPDDLETLGDD
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggacgaggacgcacgcggaccgcgttcggacgccgaggagaccgcgggctcg
agcgtcgccgatgctctgagcgccctcgagccgaagggcaaccagcgggccgtcatcgag
agccgagcggactgtacctccgtcgacgccggtgccggcaccgggaagacgacgacgatg
ctcatgcggatcgagcgggcgatcgaacgcggcgaggtcgaccccgacgacgtgctggtg
ttgaccttcgccaacgaggccgccgggagcatccgcgaggcggtcgcggaacgcctcgat
cccgcggccgcggcggcgatcgacgtctacacctaccactccttctgttaccggctagtc
cgagactacgcctactacctgggctactcgccggagttcgacgtcgtcaccgagcgcaag
cggcgccggatcgtcggccgactgctcgcgaccaacgactacggcttcgcgaccgcgacg
cggggcgacggctcgcccgacgacctcaccgccgccgtcgacgacttcatccagtcgatg
agccaggaggacgtcacgcccgacgagctccgagagcggctccccgaggtccgcaccctc
gagctctgcaacgagttcgtcctctggctcgagcggaccgccggccaggacctctcgttc
gacaacgaggcgcttcgctacttcaacgccgacgatcacctcgaggagtcccgctcgtcg
ctggtcgagtacgggaaactcctcgagtactgccgcgagaagatcgcggaggcaccggaa
ccgttccgcgaggacgccgtcgttcgcgatatcgatcgctatctccgggtcatgcaggac
acggtgacgaacgcgatcgaggcgctctcgctcgaggatcggatgaccaaacagttgccg
cgagcgctcttcggaaacgagatctggcggaccgcgaccgagcgcatcgagcagagcccg
ttcggccggctgaaacactacgtcgagttcctgcggctggcccgccactacaccgacgtc
tacgccgactaccacgacgccctcgcggaggagggcgcgctcgacttcgacgaactggtc
cggacggcgaccggactgctcgaggatggcgcggaacaccgttccgcggacgggtcgaac
gggtcggcgacccgtgagacgatcgccgacgagatcaccggcgagtggacgcaggtctac
tgcgacgagttccaggacaccgacgagacccagttcgcgctcatcaccgaactcacggac
gggccggaccgacccgacctgctcgcgatcggcgacaaggatcaagcgatctacggctgg
cgagggaccgaccgggaggggctcgaccggctcgccgacgcctacgacgaccaccggggg
atcgaactcgagctcaacttccggtcgcgccaggagatcctcgatctcaccaaccactgc
gactacggctcccagtcctcgaaacggctccgcgaggtcgggcggacccctggtgagtac
cggacggatagcgacgcgacggcaggtcgcgagacagggttcgaaacggacgaagaccgg
ccggatcgcgtcgtcaagatcgaaagcgacgcggtcggcccgtcgccggcggatcaggtc
gcgacgaccgtctcgaggctgctaaacggcgaagccgaaaacgtcccccggcgatcgctc
gaggacatcgcggtcatcgtccgcacgaatcgccacgcgcaggccgtcgccgacgagctc
cgggagcgacggatcccctacgagatctccggctcgccgcgcggcgagatcgaccccggg
atccggacgctcgtctcgtacctccgggtcctcgtcgatcccgacgccgacgcccacctc
cggcgcgtgctgctctaccggtaccggctctccgaggccgacctcgcgacgctgcagcgc
gcggacggctcgctgtacgacgccgtgatggcggtcggtccggacgcggaagtcgagtcc
acggcgctcgaggaccccgatcgcgtccggcgggcgcgcgaccacctcgcgaaactcgag
gacgtgcgagacgtctacccgctgtcggggttcgtccagcggttccgcgaggtgacccgc
ctcgagtggttcctcaccagcgaggagcgcgaggaactcgagcgcgtcgagcggttcgtc
gacgcctacaccggcgactcggtgatcgggacgctgacgccgtcgttcgtcgacgcgctc
gagcggacgcttcagggcggaggcagcgagcgaacgcgggggacccagtcggcggactcg
atcgacgtgatgaccgtccaccaggcgaaggggctggagttcgacaccgtcctcgtcccg
tacctctccgacgaggagtggtgcgtcgagcgcgattacgcccaacgagcccggtatcgg
ctgctcgcggcgacgctcgacgacgagatcgagtcgccgctgctggccgacctcgcgacc
gagaccgtcggcgaagagtggcgggtgctccacgtcgcgctcacgcgggccgagaaccac
ctgttcgtcttcgggagcgtgtacgattacgacggcgacgaggacgaactcggctgtgcg
accgctgacgcctgcctctccggcgacatcgagtggtcggtcgccggcgagcggatggag
ctgtggtcgtcgctccgcgcgagcttcgagcgggtgcgggagacctaccccgagaccgtc
gtcgaccgcaccgacgaactcgcggccgcggccagcgtcgatccggggacgatcacctac
tacgccggctacgacgaccggtacgtcgaaccgctcgagacgcgggacgcgattcggacg
gtccaccgactgggacggctgctgcgcggggagacgctgttgccggccgccgacgcggcg
agtcacgcgctcgaggcgtttggacggtttggaaccgatcgaggcgacgagggcgacgcg
gccgccgagatcggcgaggcggattcgacgcgacgggttccgaccggccgccggctctcc
gcgttgacgaccgataccgtccggttccccgtcgagaccctctcgaacgcgacgacgctg
ccggtcgcgctccgccacagctacaccgccctcgagacccacgacacctgtccgcgaaag
cactacctcgatcacgtcgtacgtgcgttcgacgatccgacggcgggcgtcggcggaacg
acggcgcgaccggagacggacgcagcgacggcaacggactcaccgctcgagtccggctcc
cggctcgtcggcaccgtcttccacgacgtcgcggaggaggcgttctaccgcgagtaccgt
acccgcgaggcgtggcgcgaggccgccgtccgccagctcaccgcacgggacctgctcgag
taccgcgagggcgttctgggctgtatcgatcggttcttcgaggccgccgcggccgactac
gacgcgccggtcgccgactgggagccggtggccgcggagctacccttctcgctcgaggac
gtcgccgacgtgaccggcgacgtcgtgggctatatcgactcgattcggcggacgcccgac
ggcgagctggcggtgctcgactacaaggcgacggccgaacggatcgcgcccgccgacgcc
acgcaactggcgctgtacgcccgcgcctgcgagcggcggttcgacgagccggtggcggcg
gtcggctacgtctacgtcagcgaggccgtcgggccgcgcgtcgacctgctcgacgcggac
gaactgcccccgtggccgaccgtccgcgagcgcctcgcggcggtcgacgatccctcgttc
gtcgagacgacgccgggcgatcactgtcagtactgcccgcacagatcgctcggctgcggg
cccgatgacctcgagaccctgggcgacgactga
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