Haloterrigena turkmenica: Htur_4080
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Entry
Htur_4080 CDS
T01154
Name
(GenBank) putative PAS/PAC sensor protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
htu
Haloterrigena turkmenica
Brite
KEGG Orthology (KO) [BR:
htu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htu03000
]
Htur_4080
Transcription factors [BR:
htu03000
]
Prokaryotic type
Helix-turn-helix
Other families
Htur_4080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
PAS_4
HTH_10
GAF
PAS_3
PAS_9
GAF_3
HTH_20
PAS
HTH_11
HTH_23
TrmB
Mnd1
Motif
Other DBs
NCBI-ProteinID:
ADB62915
UniProt:
D2S0L8
LinkDB
All DBs
Position
pHTUR01:332436..335681
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AA seq
1081 aa
AA seq
DB search
MGSSVPSPATVQAVFDQLGPPGTPFTTPEIAAEFDCSDRTIYNRLDALVDEGVIETKKVG
ARGRVWWRPVDGDIRRNGGAFNERNPVSFRDEQALSFLSDSEMAERIRKFEWAKTPLGPM
DGWPLELRVAADIMLGADEAIGLYWGEDLTLLYNDAWRELIGDKHPEALGRPAQEVFPEI
WETIEPMFADVLDGNGVGFEREQRLSLERDGQIEDAWFDYSANPILMADGSVGGVFNIAN
EITERKDAQQTLRDREGRLNAFVTSTSEIVYRMSPDWSEMYYLDGKDFIADTEDPRETWL
KEYIPPDEQERVMAAIEEAIETKSMFELEHQVHQVDGTRGWTHSRAVPILDDDGDIVEWF
GTASDVTERRRAEQALRESEQRYQRLFDSVNESIEEAFFIIERVSGEGETAANGDDPAAY
RFVETNPVFEKSIGVTDVVGKQVSDLDFDGDLPGSDVWGEVVRTGESRRFEIETTGGPLA
DGWYDVRVFPYGGADSRAAACLADDITDQKEVQRSLERLTEASRELIEADPEMVHDRVAE
LTIAVLDVEYAALWRYDEASGDLIDAISTLDTGIDAETVRHPDDASEHVWQAFIDDETAV
TNNLHVDETVPDAATLRSRLLIPLGRHGVVCIGSFQPNGFDERIVDLAETLGATLETAWD
RADSERQLQVQNEELQRLDRLNTLIREIDQALVGADTREEIDEAVCERLASSDLYEFAWL
GEYDPGTNRIEPRAWAGVDSGYVEELTITVEDTPTNRDPIARALRTGDLQVVADIATDSG
FAPWREATLERGARSLVCIPLVYDDAAYGVLTVYADRPQSDEDKRNRDVLSELGDTTAHA
LNARETRATLQTDSVVELTLRFEDADTPLYRLSRETEYTIEHQGFVPRSSGQTDVFFIVR
EISPEDLRATAERSLAFEDLDCLTERADGALFRARVSEPTLAARVTDEGAVVRSITIDSG
VATVVLDIPHTAAVREFLNRLRQWHPELELRARQSRERPLKTRQTFVTALEDRLTDRQRE
VLQTAYLSGFFEMPRVSNGQEVTHLVGVSQPTFSEHLRAAERTLCEVLFETEPYAEDIVS
T
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgtccgtaccatcgcctgccacggtccaagcggtcttcgaccagctcggtccc
cctgggacccccttcacgacgccggagatcgccgcggagttcgactgttccgaccgaacg
atctacaatcgactcgacgcgctcgtcgacgagggcgtcattgagacgaagaaagtcggc
gctcgcggacgggtgtggtggaggcccgtcgacggcgacattcgacggaacggcggcgct
ttcaacgaacggaaccccgtctcattccgagatgagcaggcactatcctttctctctgat
agcgagatggccgaacgcatccgcaagttcgagtgggccaaaacgccgcttggcccgatg
gacgggtggcccctagagttgcgggtcgcggccgacatcatgctgggggcggacgaggcc
atcggtctctactggggagaggacctgacactgctgtacaatgacgcctggcgggagttg
atcggtgacaagcatccggaggcgctggggcggcctgcccaagaggtgtttcccgagatc
tgggagacgatcgagccgatgttcgctgacgtgctggatgggaatggagttgggttcgaa
cgggaacagcgactgtcgctggaacgtgacggccagatagaggacgcgtggttcgactac
agcgccaatccgattctgatggccgacggctccgtcggtggcgtcttcaacatcgcgaac
gaaatcaccgagagaaaagacgcccaacaaaccctgcgcgacagagaggggcgactcaac
gcattcgtcacaagtacctcggaaatcgtctatcgaatgagtccggactggtcagagatg
tactacttggacggcaaggatttcatcgccgacacggaggatcctcgggaaacgtggttg
aaggagtacattccaccggacgagcaagagcgggtgatggccgccattgaggaggccatc
gagacgaaaagcatgttcgaactggagcaccaggttcaccaggtcgatggcacccgaggc
tggacgcactcacgggcagtgccgatactggacgacgacggcgacatcgtcgagtggttc
gggacggccagtgacgtcaccgagcgaaggcgcgctgaacaggctcttcgtgagtcagag
caacgctatcaaaggctgttcgactccgtcaacgagtccatcgaagaggcctttttcatc
atcgagcgggtgtccggcgagggcgagactgccgcaaacggggacgacccggcagcgtat
cgcttcgtggaaacgaacccggtgttcgagaaatccatcggtgtgaccgacgtagtcggg
aaacaagtgagcgatctcgatttcgacggcgacctccccggatcggacgtgtggggagag
gtggtccggacaggcgaatcgagacgcttcgagatcgagaccactggtggtccgctcgcc
gatggctggtacgatgttcgcgtcttcccgtatggcggagcggacagtcgagccgctgcg
tgtctcgccgacgatatcacagaccaaaaggaagtccaacggtctcttgaacggctcacc
gaggcaagccgggaactgatagaggccgatccagagatggtccacgaccgcgtggctgag
ctcacgatagcggtgcttgacgtcgagtacgctgcgctctggcggtatgacgaggcaagc
ggagacttgatcgacgccatcagcactctcgacacggggatcgatgccgaaaccgtccga
cacccggatgatgcctctgagcacgtctggcaggcgtttatcgacgatgagaccgccgtc
acaaacaacctccacgtcgacgagaccgtgccggacgcagcgaccctgcggagccgcctg
ctcattccactgggcagacatggcgttgtctgtatcggatccttccagccgaatggcttc
gatgagcggatagtcgaccttgccgaaactctcggggcgacgctcgaaacggcgtgggac
cgtgccgacagcgaacgccaattgcaagtgcagaacgaagaactgcaacgcctcgaccgt
ctcaacaccctcatacgagagatcgatcaggcacttgtgggagccgatacccgcgaggag
atcgatgaggcagtctgcgaacgactggccagctccgacctctacgagttcgcgtggctc
ggagagtacgatccggggaccaaccggatagaaccgcgtgcgtgggctggcgtcgacagc
ggctacgtagaggagctcacgatcacggtcgaggacacaccgaccaaccgagacccaatc
gcccgtgccctccgcacgggcgacttgcaggtggttgcagacatcgctacggatagcggc
ttcgccccctggcgggaagcgacgctcgaacgcggcgcccggtcgctggtctgcattcca
ctcgtttacgacgacgcggcgtacggcgtgttgacagtctacgccgaccgtccccagtcc
gacgaggacaaacggaatcgggacgtgctgtcggaactcggtgatacgaccgcccatgcg
ctcaacgcgagggagacgcgggcgacgttgcagaccgacagcgtcgtcgaactcacgctc
cgattcgaggacgctgacacgccgctgtatcgtctctcccgggagacggagtataccatc
gagcatcaggggttcgttccccgatcgagcgggcagaccgacgtcttcttcatcgttcgt
gaaatctcgccggaagatctccgggccacagcagaacgctcgctcgcgttcgaggaccta
gactgtctcaccgagagggccgatggagcactgttcagggcacgggtgtctgagccgacg
ctcgccgcacgggtcactgacgagggggctgtcgtgcgttcgattaccatcgattccggg
gttgcaaccgttgttctcgatatcccccacacggcagcggtccgcgagttcctgaaccga
ctccgccagtggcatccggaattggagctacgcgcccgccagtcgcgcgaacggccactg
aagacccggcaaaccttcgtgacggcgctcgaggaccgcctgacggatcgacagcgggaa
gtcctgcagacggcctacctgagcggcttcttcgagatgccacgggtcagtaacggacag
gaggtcacacacctggtcggcgtctcacagccgacgttctctgagcacctgcgtgccgct
gaacgtaccctgtgtgaggtcctattcgagaccgaaccgtatgccgaggatatcgtctcg
acgtag
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