Billgrantia tianxiuensis: EKK97_02900
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Entry
EKK97_02900 CDS
T08051
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
htx
Billgrantia tianxiuensis
Pathway
htx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
htx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EKK97_02900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htx03400
]
EKK97_02900
Enzymes [BR:
htx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EKK97_02900
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EKK97_02900
DNA repair and recombination proteins [BR:
htx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EKK97_02900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF5817
Motif
Other DBs
NCBI-ProteinID:
QHC48764
UniProt:
A0A6I6SK01
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All DBs
Position
626975..627799
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETTRRGIAPHVEGREIVEAIVRQPRLRVPVPDDFVERLVGSRIGILSRRAKYL
LLPIEGERDGSLIWHLGMSGSLRIARLGDLPKKHDHVDLVLDDGAILRYHDPRRFGFVDW
LAGSLESDPRLANLGPEPLSEAFDAERLYRLSRCRRMAVKPFLMDNAVVVGVGNIYASEA
LFLAGIDPRRAAGRISLERYERLAAAVREVLAAAITQGGTTLRDFVSGTGEPGYFKQRLN
VYGRHGQGCRRCNGELRLVTLGQRASVFCPSCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcttcccgaagtcgagactacccggcgcggcatcgctccccacgtggagggg
cgcgagatcgtcgaggcgatagtgcgccagccgcgcctgcgcgtgccggtgcccgacgat
ttcgtcgagcgcctggtgggttctcgcatcggcatcctatcgcggcgcgccaagtatctg
ctgctgccgatcgagggcgagcgcgacggcagcctgatctggcatctgggcatgtcgggc
agcctgcgcatcgcccggctgggcgatctgcccaagaagcacgaccatgtcgacctggtg
ctcgacgacggcgccatcctgcgttaccacgatccgcgccgcttcggcttcgtcgactgg
ctcgccggcagcttggagagcgacccgcgcctagcgaacctggggccggaaccgctctcc
gaggccttcgacgctgagcggctctatcggctctcgcgttgccggcgcatggccgtgaaa
ccgttcctgatggacaatgccgtagtggtcggcgtgggcaacatctacgccagcgaggcg
ctgttcctggccggcatcgacccgcgccgggcggcgggacgcatctccctcgagcgctac
gagcgcctggccgcggcggtgcgcgaggttctggccgccgccatcacccagggcggcacc
accctgcgcgacttcgttagcggcactggcgagccgggctacttcaagcagcgcctcaac
gtctatggccgccacggccagggttgccggcgctgcaacggcgagctgcggctggtgacg
ctgggccagcgggccagtgtattctgcccctcttgccaaaaatga
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