Billgrantia tianxiuensis: EKK97_09585
Help
Entry
EKK97_09585 CDS
T08051
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein VgrG
Organism
htx
Billgrantia tianxiuensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
RHS_repeat
Gp5_trimer_C
DUF6531
Phage_base_V
TEN_YD-shell
RHS
DUF6484
DUF2345
OCRE
OB_DEPS-1_2nd
Motif
Other DBs
NCBI-ProteinID:
QHC49807
UniProt:
A0A6I6SQH5
LinkDB
All DBs
Position
2057705..2063380
Genome browser
AA seq
1891 aa
AA seq
DB search
MRNATGWQFTLALAGAEDLAVIEFTHKEALSQPFELSVRFASRDGRLSATDILDREATLT
IWQEGEVLRRVHGIVSEFARGDRGHRHTFYRVEIRPALWRLSLRQNSRIFQEVSPLTVLN
TLCDEHGLTDLAFAATREPESREYLTQYREDDLAFVERLAAEEGLFYFHEFFEVGGEEGA
HAAHRLVFADAPQILTHLGQRTYHSRAGGTPPARHVRKLHQHARVAPASATLKDYSFKNP
AYGQLHDHAARDLEAHGQRSDYEHYDYPGRYKRDASGQTFTRIRLEALRRSANTADAESD
LPELAPGVRFALTDHDLDELNRDWQVLGVVHHGKQPQALEEDGFVQGSEQTDQSDGLQGR
AGSEAMTKYHNELVLMPADQAWRPEPNPRPRVDGPQIAFVVGPEGEEIYCDEHGRVKVQF
PWDRYAEPNETASAWLRVSQDWAGGGYGSLAIPRIGHEVLVSYLEGDPDQPLITGRVYNA
VSTPPYVLPEHKTRTVIRTQSHQGEGFQELRFEDEAGQEQIWLHAQKDLELLTNNDRTEE
IGHDSHLTVHHHRISEIHADDHLTVRGQRHLKVDGDDHLIVGTTRHEKTARAQLVEAGQE
VHHRAGSKTVIDAGAEITLKAGGSFLKLDPSGITIVGAQVKINSGGSPGSGSGQGAAAAL
LPGAATPEASEDVTLKSVGAGLFSQLGNLLDLSNPAMLDGLANRCSTCEPAVGSPVNPLL
GAKLLPAETDFALPAPRPFVFSRGYLSANARIGVLGQGWSVPGDGLSLTLRDDACVIHDA
QGRDITFGALAPGQSRYSPTEQLWLRRGGEPNELDAGKDGENVRWQALPEALRHDPQTIV
LSDAGGLYYVFAPTQEASSTWRLAQELDRNGYATTYRWEAELLVQVEDSAGRHFHFDYES
LLPAGEGDSGQRLSGVRLVREADGSAQDDWLVRYAYSEEGDLISVRLRHGEVVREFEWQD
HILTAHRVPGGIEARYTWDRHVPEGRVIAQEESGGLTRTYAYHPDHTLVTDSLGREERYH
FSGTGPGQRWTAHTRADGSVIQYRYDHAGQRIATVDPLGRETALERDESGQVIAQIGPDG
SRWAITRDAQGQPIAVAGPENHRWQLERDARGNLIRVTGPGGTTIFAFENEALPDRPTAV
TDAGGSTRRLEWNALGQLVAETDCSAQTTRYDYDSRGYLLTVTNALGETTRTTHDEMGRR
IATQLPDGSRWQHHHDLQGRLAEQEGPQGYRQQFHYDAHGRPVLRIDADGGREHYAYDEA
GRLSELTLANGAGYRFEYDEMDRLVSETGPDGREQRYAYDAAGQLSTRTEAHRLGPDGQP
LAAHYEFDANGRLIARHLPATDSAPASTERYQWRADGQLSGVVNPESEVFFAYDTAGRPI
GERQRHHADGDIAAWQWQHQQRLTATGAPQASRYGDLPELAWHTYGSGHLHGLSAPGLGL
EIALEPDALHRETQRRLSSADQPQPLILERGYTALGQLDHFSLRGPGSANGEQHYRYDAL
GRLSFRSQGSASPVIAYSYDAAGRLIASQHGDRAHRYPVDAAGNRLEGQASAQPDNRLAQ
LDGARYRHDGAGNLIERETSNGERLSLGYDGANRLVRLTRTSAQGATEEARYRYDALGRR
ISKTVHHANGTTATTHYGWDGDRLVHEAKERHQTTVVYEPGSFVPMLRIDQAGDGAAKQI
SAFVTDALGTPMQLVTPGGDTLWQAQPDDWAAVTNEQGRTAQPIRFQGQWYDEESGLYYN
RHRYYDPQQGRYISQDPIGLKGGRNLYGYVSNPTGMVDPLGLFGRPGPIDQSGRQGRVGA
PITSQGPAPRSPLERLTNTALGSRVKTVTGGTLKIDPATGAFTKTNPYLWGFLAIFKPNE
ISVLQTRNYDSNGDGLSDEHYQIGMCVPGVR
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacgctaccggatggcaattcaccctggccttggccggggccgaggacctggcg
gtcattgaattcactcacaaggaagcgctgtcccagcccttcgaactgagcgtgcgcttc
gccagccgtgacggccgcctctccgccaccgatatcctcgatcgcgaggccaccctgacg
atctggcaggagggcgaggtgctgcgccgcgttcatggcatcgtcagcgagttcgcccgt
ggcgaccgcggccaccgccacaccttctatcgggtcgagatccgccccgcgctgtggcgc
ctctcgctgcggcagaactcgcgcatcttccaggaggtctcgccgctcacggtgctcaac
accctgtgcgacgagcacggcctgaccgatctcgccttcgccgccacccgcgaacccgag
tctcgggagtaccttacccagtaccgggaagacgatctcgccttcgtcgagcgcctggcc
gccgaagaggggttgttctacttccatgagttcttcgaggtcgggggtgaagagggcgct
cacgccgcccaccgcctggtgttcgccgatgcgccccagatcctgactcacctcgggcag
cgcacctaccatagccgcgccggaggcacgccgccggcgcgtcatgtgcgcaagctgcac
cagcacgcccgggttgccccggcctcggccacgctcaaggactactcgttcaagaacccg
gcctacggtcagctgcacgaccacgccgcacgcgatcttgaggcgcacggtcagagaagc
gactacgaacactacgactaccccggccgctacaagcgcgatgcctccggccagaccttc
acccgcatccgcctcgaagcgctgcgccgcagcgccaacaccgccgacgccgagagcgac
ctgcccgagcttgccccgggcgtgcgctttgcgctcaccgaccacgatctcgacgagctc
aaccgcgactggcaggtgctcggcgtggtccaccacggcaagcagccccaggcgctggaa
gaggacggcttcgttcagggcagcgagcaaaccgatcaaagtgatggcctgcagggtcgg
gcaggctcggaagccatgaccaagtaccataacgaactggtcctcatgcccgccgaccag
gcctggcgccccgagcccaatccccggccccgggtcgacggcccccagatcgccttcgtc
gtcggtcccgagggcgaagagatctattgcgacgagcacggccgggtcaaggtccagttc
ccctgggaccgctatgccgaacccaacgaaacggccagcgcctggctgagagtgagtcag
gactgggccggcggcggctacggcagcctggcgattcccaggatcggccatgaggtcctc
gtcagctacctggagggcgatcccgatcagccgttgatcaccgggcgggtctacaacgcc
gtcagcacgccgccctacgtgttgcccgagcacaagacccgtaccgtcattcgcacccag
agtcaccagggcgaaggcttccaggaactgcgcttcgaggacgaagcgggccaggagcag
atctggctccacgcccagaaggacctggagctgctgacgaacaacgaccgcaccgaagag
atcggccacgacagccacctcaccgtgcaccatcaccgcatcagcgagattcacgccgac
gaccacctcaccgtgcgcggccagcgacacctcaaggtcgatggcgacgaccacctcatc
gtcggtactacgcgccacgaaaagaccgcccgtgcccagctcgtcgaggctggccaggaa
gtgcaccaccgggccggcagcaagaccgtgatcgacgccggcgccgagatcaccctcaag
gccggcggcagcttcctcaagctcgaccccagcggcatcaccatcgtcggcgcccaggtc
aagatcaactccggtggcagccccggttcggggagcgggcagggggcggcggcggcgctg
ctgccgggggccgccacgccggaagcgagcgaggacgtgacgctcaaatcggttggggcc
gggctgttttcacagctaggtaatttgttggatctcagcaatcccgccatgctcgatggg
ttggccaaccgctgcagcacctgcgagcctgccgtgggcagtccggtcaatccgctgctg
ggcgccaagctgctgcccgcggaaaccgacttcgccttgccggcaccgcggcccttcgtg
ttctcgcgcggctatctctccgccaatgcccgtatcggcgtgctggggcaggggtggtcg
gtacccggcgacggcctttcgctcaccctgcgcgacgatgcctgtgtgattcacgatgcc
cagggccgcgacatcaccttcggcgccttggcgccgggtcagtcgcgctattcgcccacc
gagcagctttggctgcggcgcggtggcgagccgaacgagctggatgcgggcaaggatggc
gaaaacgtccgctggcaggccttgcctgaagccctgcgccacgacccgcagaccatcgtg
ctgagcgatgccggtggtctctactacgtcttcgcaccgacgcaggaggcatcgtctacc
tggcgcctcgcccaggaactggaccgcaacggctacgccaccacctaccgctgggaagcc
gagctgctcgtccaggtcgaagacagcgccgggcgccacttccacttcgactacgaatca
ctgctgccggcgggagagggtgacagcggccagcgcctcagcggcgtacgcctggtgcgt
gaggccgatggcagcgcccaggacgactggctggtgcgctatgcctacagcgaggaaggc
gatctgatcagcgtgcggctgcgtcatggcgaggtcgtacgcgaattcgaatggcaggac
cacatactcacggctcaccgcgtgcccggcggtatcgaagcccgctacacctgggatcgc
catgtcccggaaggccgggtaattgcccaggaggagagcggtgggctgacgcgcacctac
gcctaccatccggatcacaccctggtgaccgacagcctcggccgcgaggagcgctaccac
ttcagcggcactggccccggccagcgctggacggctcacacccgtgccgatggctcggtc
atccaataccgctacgatcacgccgggcagcgcatcgccaccgtcgatccgctcggccga
gagaccgcgctcgaacgcgatgaaagcggacaggtcatcgcccagataggccctgatggc
agccgctgggccattacccgcgacgcgcaagggcagcccatcgccgtggctggcccggaa
aaccaccgctggcagctcgagcgtgatgcccgcggcaacctcattcgtgtcaccggcccc
gggggcaccaccatcttcgctttcgagaacgaagcgctgcccgatcgtcccaccgccgtc
accgacgccggcggtagcacccgccgactcgaatggaacgctctgggccagctcgttgcc
gagaccgactgctccgctcagaccacccgctacgactacgatagccgtggctacctgctg
accgtgaccaacgctctgggtgaaaccacccgcaccacccacgacgagatgggccggcgc
atcgccacccaactgcctgacggcagccgctggcagcatcaccacgacctgcagggccgg
ctcgctgagcaagagggaccgcaaggctaccggcagcagttccactacgacgcccatggt
cggcccgtactgcgaatcgacgccgacggcggtcgcgagcattacgcctacgacgaagct
ggccgactcagtgaactgaccctggccaacggcgccggctaccgcttcgagtacgacgag
atggatcgcctcgtcagcgagaccggcccggacggccgcgagcagcgctacgcctacgac
gccgctggccaactgagtactcgcaccgaagcccaccggcttggtcccgacgggcagccg
ctcgccgctcactacgagttcgatgccaacggtcgcctgatcgctcgccatttgcccgca
accgattcggccccggccagcaccgagcgctatcagtggcgcgccgacggccagctcagc
ggtgtcgtcaatcctgagagcgaggtcttcttcgcttatgacactgccggtcgtcccatt
ggcgaacggcagcgccatcatgccgatggcgacatagccgcctggcaatggcagcaccag
caacgcctgaccgccaccggcgcgccccaggctagccgctacggtgatctgcccgaactc
gcctggcatacctacggcagcggccacctgcacggcctcagcgcccctggcctgggcctc
gaaatcgctctcgagcctgatgccctgcaccgtgaaacccaacgccgcctgagcagcgcc
gaccagccccaaccgctgattctcgaacgtggctacaccgcacttggccaactggatcac
ttcagcctgcgtggccccggcagcgccaatggcgagcagcactaccgctacgacgccctc
ggccggctcagcttccgcagccagggaagtgccagcccggtcatcgcctatagctacgac
gcggcggggcgactgatcgccagtcagcacggtgaccgtgcccaccgctacccggtggac
gctgccggcaaccgcctcgaaggccaagccagtgctcagcccgacaaccgcctggcccag
ctcgacggtgcccgctatcgtcacgacggcgccggcaacctgatcgagcgcgagacttcc
aatggcgaacggctcagcctcggctacgacggtgccaaccgcctggtgcggttgacccgt
accagcgctcagggagcgaccgaagaagcccgctaccgctacgacgccctggggcgacgc
atcagcaagaccgtccatcacgccaacggcaccaccgccaccacccactacggctgggac
ggcgatcggctcgtgcacgaagcgaaagagcgccaccaaaccaccgtggtctacgagccc
ggcagcttcgtgcccatgctccgaatcgaccaggccggtgatggcgcagccaagcagatc
agtgccttcgtcactgatgccctgggcacacccatgcagctcgtcacgcccgggggcgac
accctgtggcaagcccagccggacgactgggccgcggtcaccaacgaacagggccgcacc
gcccagcccatccgcttccaggggcagtggtacgatgaagagagtggtctgtactacaat
cgccaccgctactacgacccgcagcagggccggtacatcagccaggacccgattggccta
aagggtggcaggaacctgtatggttatgtcagcaacccgactgggatggtggatccgtta
gggttgtttggtaggccggggcctatagatcagtcaggtcggcaaggtcgagtgggggcc
ccaattacttcacaaggccctgctccaagatctccgcttgaacgactgactaacacagca
ttaggcagcagggtgaagactgttactggtggaacgcttaagattgatcctgctactggg
gcattcactaaaaccaatccctatttgtggggttttttggcaatatttaaaccgaatgag
ataagtgttttgcaaacgcgaaactatgattccaatggggatggcttgtccgatgagcac
tatcagattgggatgtgcgtcccaggggttaggtaa
DBGET
integrated database retrieval system
